Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107453377 Ptep1.0/2.0 NW_024969770.1 839643 868810 + vacuolar protein sorting-associated protein 26B-like aug3.g24512,aug3.g23786,aug3.g23785 LOC107443992,LOC107453377 0
LOC122269520 Ptep1.0/2.0 NW_024969847.1 1017433 1020672 - uncharacterized LOC122269520 aug3.g24518 NA 6e-116
LOC107444508 Ptep1.0/2.0 NW_024970289.1 208107 307475 + dynein axonemal heavy chain 8 aug3.g17922,aug3.g24510,aug3.g22206 LOC107444508,LOC107444447 0
LOC107455844 Ptep1.0/2.0 NW_024970537.1 289294 289974 - histone-lysine N-methyltransferase SETMAR-like aug3.g8076,aug3.g24783,aug3.g25673,aug3.g24511 LOC107455844 0
LOC107444018 Ptep1.0/2.0 NW_024976148.1 704 4434 + protein pelota homolog aug3.g24517,aug3.g7709 LOC107444018 0
LOC107444017 Ptep1.0/2.0 NW_024993446.1 61 1111 + keratin, type I cytoskeletal 13-like aug3.g24516 LOC107444017 0
6 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02