Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107437949 Ptep1.0/2.0 NW_024969693.1 974710 1028443 + kinesin-like protein KIF17 aug3.g26383,aug3.g24522,aug3.g20217 LOC107437949 0
LOC122269574 Ptep1.0/2.0 NW_024969864.1 92543 99509 + zinc finger protein 346-like aug3.g24523 NA 0
LOC107448856 Ptep1.0/2.0 NW_024970038.1 442363 467159 - WD repeat-containing protein WRAP73 aug3.g2452 LOC107448856 0
LOC107436904 Ptep1.0/2.0 NW_024970255.1 105425 131593 + TBC1 domain family member 10A aug3.g11915,aug3.g24528 LOC107436904,LOC107444169 0
LOC107444162 Ptep1.0/2.0 NW_024971482.1 81116 81487 + histone H2B aug3.g24527 LOC107444162 0
LOC122273344 Ptep1.0/2.0 NW_024975587.1 2146 4440 - uncharacterized LOC122273344 aug3.g2452 NA 3e-129
6 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02