Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107444282 Ptep1.0/2.0 NW_024969695.1 1668311 1701518 + 28S ribosomal protein S29, mitochondrial aug3.g10039,aug3.g24537 LOC107444282 0
LOC122269279 Ptep1.0/2.0 NW_024969781.1 422848 433819 - proteoglycan 4-like aug3.g4493,aug3.g24535 LOC107452064 0
LOC122269452 Ptep1.0/2.0 NW_024969823.1 5998 26351 - uncharacterized LOC122269452 aug3.g5701,aug3.g24539 NA 0
LOC107448855 Ptep1.0/2.0 NW_024970038.1 435922 440998 + gastrula zinc finger protein XlCGF26.1-like aug3.g2453 LOC107448855 0
LOC107439751_1 Ptep1.0/2.0 NW_024970437.1 65977 107225 - single-minded homolog 2-like aug3.g9701,aug3.g24809,aug3.g24532,aug3.g13097 LOC107439751 0
LOC107439751 Ptep1.0/2.0 NW_024970522.1 279133 303793 - single-minded homolog 2-like aug3.g9701,aug3.g24809,aug3.g24532,aug3.g13097 LOC107439751 0
LOC122268444 Ptep1.0/2.0 NW_024974415.1 370 7207 + uncharacterized LOC122268444 aug3.g24537 LOC107444282 3e-150
7 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02