Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107448949 Ptep1.0/2.0 NW_024969736.1 1375060 1397678 + F-box only protein 8 aug3.g2475 LOC107448949 0
LOC107444869 Ptep1.0/2.0 NW_024969805.1 58362 127004 - very low-density lipoprotein receptor aug3.g18146,aug3.g24755,aug3.g24480,aug3.g24936 LOC107445543,LOC107444869,LOC107446416 0
LOC107445030 Ptep1.0/2.0 NW_024970408.1 136091 199766 + nephrin aug3.g7466,aug3.g24752 LOC107445030 0
LOC122270991 Ptep1.0/2.0 NW_024970491.1 195024 196045 + pseudogene aug3.g2942,aug3.g24758 NA 0
LOC107445493 Ptep1.0/2.0 NW_024971992.1 41623 42114 - extensin-like aug3.g24750,aug3.g18390,aug3.g12240,aug3.g10966 LOC107445493 0
5 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02