Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107448984 Ptep1.0/2.0 NW_024969734.1 208846 254652 + uncharacterized LOC107448984 aug3.g2512 LOC107448984 5e-74
LOC107448983 Ptep1.0/2.0 NW_024969734.1 232277 871038 - fat-like cadherin-related tumor suppressor homolog aug3.g2512,aug3.g2513,aug3.g21994,aug3.g12222 LOC107453726,LOC107448983 0
LOC107455626 Ptep1.0/2.0 NW_024969826.1 659681 697136 + ubiquilin-1 aug3.g25120 LOC107455626 0
LOC107455741 Ptep1.0/2.0 NW_024969954.1 20024 36056 - uncharacterized LOC107455741 aug3.g25122 LOC107455741 0
LOC107455729 Ptep1.0/2.0 NW_024969954.1 39704 63137 + N-acetylglucosamine-6-phosphate deacetylase aug3.g25123 LOC107455729 0
LOC107455747 Ptep1.0/2.0 NW_024969954.1 70688 74207 - rhythmically expressed gene 2 protein aug3.g25124 LOC107455747 0
LOC107455744 Ptep1.0/2.0 NW_024969954.1 74395 110736 + HCLS1-binding protein 3 aug3.g25125 LOC107455744 0
LOC107455742 Ptep1.0/2.0 NW_024969954.1 252968 304281 + protein hunchback-like aug3.g25126 LOC107455742 0
LOC107455740 Ptep1.0/2.0 NW_024969954.1 324937 344160 + protein CDV3 homolog A aug3.g25128 LOC107455740 0
LOC107455730 Ptep1.0/2.0 NW_024969954.1 358308 409450 - uncharacterized LOC107455730 aug3.g25129 LOC107455730 0
LOC107455735 Ptep1.0/2.0 NW_024971535.1 11384 79815 + protein DENND6A aug3.g25121 LOC107455735 0
11 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02