Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107449023 Ptep1.0/2.0 NW_024969596.1 1796453 1911436 + uncharacterized LOC107449023 aug3.g2519 LOC107449023 0
LOC110282173 Ptep1.0/2.0 NW_024969851.1 24260 112940 - nephrin-like aug3.g25196 LOC110282173 0
LOC107456176 Ptep1.0/2.0 NW_024969851.1 504925 672953 + hemicentin-2 aug3.g25199 LOC107456176 0
LOC107439613 Ptep1.0/2.0 NW_024970091.1 257510 284519 + nucleosome assembly protein 1-like 1 aug3.g13912,aug3.g25195 LOC107439613 0
LOC107440297 Ptep1.0/2.0 NW_024970247.1 159390 221570 - nephrin aug3.g14427,aug3.g25191 LOC107440297 0
LOC107456174 Ptep1.0/2.0 NW_024970247.1 390920 391370 - nucleosome assembly protein 1-like 4 aug3.g25195 LOC107456174 0
6 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02