Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107449018 Ptep1.0/2.0 NW_024969596.1 1538529 1556312 - AP-3 complex subunit mu-2 aug3.g2529 LOC107449018 0
LOC107449021 Ptep1.0/2.0 NW_024969596.1 1560088 1572378 + deoxyribodipyrimidine photo-lyase aug3.g2528 LOC107449021 0
LOC107449012 Ptep1.0/2.0 NW_024969596.1 1581171 1669693 - dynein axonemal heavy chain 2 aug3.g2526,aug3.g2527 LOC107449012 0
LOC122271225 Ptep1.0/2.0 NW_024969596.1 1671774 1677031 - uncharacterized LOC122271225 aug3.g2526 LOC107449003 1e-167
LOC107449003 Ptep1.0/2.0 NW_024969596.1 1682200 1705983 - dynein-1-beta heavy chain, flagellar inner arm I1 complex aug3.g2526 LOC107449003 0
LOC107449020 Ptep1.0/2.0 NW_024969596.1 1706312 1707235 + ubiquitin-conjugating enzyme E2 N aug3.g2525 LOC107449020 0
LOC107449002 Ptep1.0/2.0 NW_024969596.1 1714450 1727867 - presenilins-associated rhomboid-like protein, mitochondrial aug3.g2524 LOC107449002 0
LOC107449014 Ptep1.0/2.0 NW_024969596.1 1727988 1729445 + chromatin complexes subunit BAP18 aug3.g2523 LOC107449014 0
LOC107449007 Ptep1.0/2.0 NW_024969596.1 1733595 1745111 + ribonuclease H2 subunit B aug3.g2522 LOC107449007 0
LOC107449001 Ptep1.0/2.0 NW_024969596.1 1752602 1758710 + adhesive plaque matrix protein-like aug3.g2522 LOC107449001 0
LOC107449011 Ptep1.0/2.0 NW_024969596.1 1763572 1768374 + AP-2 complex subunit mu aug3.g2521 LOC107449011 0
LOC107449019 Ptep1.0/2.0 NW_024969596.1 1775057 1783756 - glutathione S-transferase kappa 1 aug3.g2520 LOC107449019 0
LOC122269579 Ptep1.0/2.0 NW_024969611.1 524617 525653 - uncharacterized LOC122269579 aug3.g25281 NA 0
LOC107456614 Ptep1.0/2.0 NW_024969614.1 236714 254352 + proteasome subunit alpha type-5 aug3.g25268 LOC107456614 0
LOC107456611 Ptep1.0/2.0 NW_024969614.1 290716 296014 - solute carrier family 10 member 6 aug3.g25269 LOC107456611 0
LOC107456613 Ptep1.0/2.0 NW_024969614.1 296317 333420 + AMME syndrome candidate gene 1 protein homolog aug3.g25270 LOC107456613 0
LOC107456607 Ptep1.0/2.0 NW_024969614.1 353124 1062344 - CUGBP Elav-like family member 4 aug3.g25271 LOC107456607,LOC107456606 0
LOC107456609 Ptep1.0/2.0 NW_024969614.1 1404331 1482034 - CUGBP Elav-like family member 4 aug3.g25275 LOC107456609 0
LOC107456615 Ptep1.0/2.0 NW_024969614.1 1563517 1578351 + putative deoxyribonuclease TATDN2 aug3.g25276 LOC107456615 0
LOC107456608 Ptep1.0/2.0 NW_024969614.1 1581596 1652626 - polyamine-transporting ATPase 13A3 aug3.g25277 LOC107456608 0
LOC107456525 Ptep1.0/2.0 NW_024969618.1 110060 125331 - delta-like protein 1 aug3.g25248 LOC107456525 0
LOC107456529 Ptep1.0/2.0 NW_024969618.1 366912 393789 - alpha-soluble NSF attachment protein aug3.g25249 LOC107456529 0
LOC107456528 Ptep1.0/2.0 NW_024969618.1 397985 406933 + uncharacterized LOC107456528 aug3.g25250 LOC107456528 0
LOC107456517 Ptep1.0/2.0 NW_024969618.1 437407 449931 + ras-related protein Rab-3 aug3.g24891,aug3.g25251 LOC110282473,LOC107456517 0
LOC107456512 Ptep1.0/2.0 NW_024969618.1 462458 490864 + UDP-glucose 4-epimerase aug3.g25252 LOC107456512 0
LOC107456522 Ptep1.0/2.0 NW_024969618.1 490544 502028 - UDP-N-acetylglucosamine transferase subunit ALG14 homolog aug3.g25253 LOC107456522 0
LOC107456513 Ptep1.0/2.0 NW_024969618.1 507205 523469 - U1 small nuclear ribonucleoprotein A aug3.g25254 LOC107456513 0
LOC122268356 Ptep1.0/2.0 NW_024969618.1 523535 531602 + 60S ribosomal protein L12-like aug3.g25255 NA 9e-149
LOC107456527 Ptep1.0/2.0 NW_024969618.1 538235 542148 - zinc finger protein 585A aug3.g25256,aug3.g25257 LOC107456527 0
LOC107456516 Ptep1.0/2.0 NW_024969618.1 551025 558966 - uncharacterized LOC107456516 aug3.g25258 LOC107456516 0
LOC107456520 Ptep1.0/2.0 NW_024969618.1 561334 567906 + uncharacterized LOC107456520 aug3.g25259 LOC107456520 0
LOC107456524 Ptep1.0/2.0 NW_024969618.1 572812 598899 + nucleolin aug3.g25260 LOC107456524,LOC107456511 0
LOC107456523 Ptep1.0/2.0 NW_024969618.1 610909 670183 + GATA zinc finger domain-containing protein 14 aug3.g25261,aug3.g24318 LOC107442804,LOC107456523 0
LOC107456521 Ptep1.0/2.0 NW_024969618.1 671428 785428 - ephrin-B2a aug3.g25262 LOC107456521 0
LOC107456515 Ptep1.0/2.0 NW_024969618.1 1149192 1154776 - uncharacterized LOC107456515 aug3.g25266 LOC107456515 0
LOC107456518 Ptep1.0/2.0 NW_024969618.1 1193301 1206258 - adhesion G-protein coupled receptor D1-like aug3.g25267 LOC107456518 0
LOC122270027 Ptep1.0/2.0 NW_024969618.1 1207248 1217041 - adhesion G-protein coupled receptor D1-like aug3.g25267 LOC107456518 0
LOC122270518 Ptep1.0/2.0 NW_024969627.1 594837 605854 + uncharacterized LOC122270518 aug3.g16022,aug3.g25220 NA 0
LOC107456264 Ptep1.0/2.0 NW_024969649.1 794 57607 + dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11 aug3.g25218,aug3.g25219 LOC107439619,LOC107456264 0
LOC107456270 Ptep1.0/2.0 NW_024969649.1 65144 66001 - maleylacetoacetate isomerase-like aug3.g25217 LOC107456270 0
LOC107456269 Ptep1.0/2.0 NW_024969649.1 135776 397332 + probable G-protein coupled receptor CG31760 aug3.g25215 LOC107456269,LOC107456271 0
LOC107456272 Ptep1.0/2.0 NW_024969649.1 592143 605670 + uncharacterized LOC107456272 aug3.g25212 LOC107456272 0
LOC107456262 Ptep1.0/2.0 NW_024969649.1 606631 641728 - ralBP1-associated Eps domain-containing protein 1 aug3.g25211,aug3.g25212 LOC107456262 0
LOC107456267 Ptep1.0/2.0 NW_024969649.1 641985 659598 + histone-binding protein RBBP4 aug3.g25210,aug3.g21325 LOC107450791,LOC107456267 0
LOC107456266 Ptep1.0/2.0 NW_024969649.1 660673 684826 - acetyl-CoA acetyltransferase, mitochondrial aug3.g25209 LOC107456266 0
LOC107456268 Ptep1.0/2.0 NW_024969649.1 731072 752963 + moesin/ezrin/radixin homolog 1 aug3.g25208 LOC107456268 0
LOC107455703 Ptep1.0/2.0 NW_024969649.1 766036 830584 + probable DNA double-strand break repair Rad50 ATPase aug3.g7975,aug3.g25207 LOC107455703 0
LOC107455509 Ptep1.0/2.0 NW_024969703.1 12093 51814 + zinc finger protein 546-like aug3.g25246 LOC107455509 0
LOC122268915 Ptep1.0/2.0 NW_024969703.1 19704 27494 + uncharacterized LOC122268915 aug3.g25247 NA 0
LOC122268928 Ptep1.0/2.0 NW_024969703.1 45211 51600 + zinc finger protein 37A-like aug3.g25246 NA 8e-88
LOC122268914 Ptep1.0/2.0 NW_024969703.1 56612 65485 + uncharacterized LOC122268914 aug3.g25245 NA 0
LOC110282082 Ptep1.0/2.0 NW_024969703.1 113254 131658 + zinc finger protein 300 aug3.g25244 LOC110282082 9e-117
LOC122268931 Ptep1.0/2.0 NW_024969703.1 131167 134374 + zinc finger protein 350-like aug3.g25244 NA 9e-42
LOC122268932 Ptep1.0/2.0 NW_024969703.1 134455 148147 + zinc finger protein 54-like aug3.g25243 NA 2e-174
LOC107456386 Ptep1.0/2.0 NW_024969703.1 136954 143615 + zinc finger protein 175 aug3.g25243 LOC107456386 3e-133
LOC122268933 Ptep1.0/2.0 NW_024969703.1 182308 188111 + zinc finger protein 28-like aug3.g25241 NA 4e-103
LOC110282086 Ptep1.0/2.0 NW_024969703.1 189236 194490 + zinc finger and BTB domain-containing protein 46 aug3.g25241 LOC110282086 2e-113
LOC122268918 Ptep1.0/2.0 NW_024969703.1 208785 215798 + uncharacterized LOC122268918 aug3.g25240 NA 2e-92
LOC107456375 Ptep1.0/2.0 NW_024969703.1 221014 262105 + oocyte zinc finger protein XlCOF6 aug3.g25240 LOC107456375 1e-146
LOC107456390 Ptep1.0/2.0 NW_024969703.1 361853 364993 + uncharacterized LOC107456390 aug3.g25237 LOC107456390 2e-138
LOC122268935 Ptep1.0/2.0 NW_024969703.1 383544 390366 + zinc finger protein 263-like aug3.g25234 NA 0.00000002
LOC122268937 Ptep1.0/2.0 NW_024969703.1 468131 474171 + zinc finger protein 566-like aug3.g25235 NA 7e-40
LOC122268938 Ptep1.0/2.0 NW_024969703.1 493372 501338 + transcription factor che-1-like aug3.g25235 NA 2e-91
LOC110282083 Ptep1.0/2.0 NW_024969703.1 531944 549578 + zinc finger and BTB domain-containing protein 8B-like aug3.g25234 LOC110282083 1e-28
LOC107456387 Ptep1.0/2.0 NW_024969703.1 551998 560825 + uncharacterized LOC107456387 aug3.g25234 LOC107456387 7e-74
LOC107456363 Ptep1.0/2.0 NW_024969703.1 561331 582237 + uncharacterized LOC107456363 aug3.g25234 LOC107456363 1e-134
LOC107456393 Ptep1.0/2.0 NW_024969703.1 608133 956328 + tensin-1 aug3.g25232 LOC107456393 0
LOC122268925 Ptep1.0/2.0 NW_024969703.1 651218 657345 - uncharacterized LOC122268925 aug3.g25233 NA 0
LOC122268926 Ptep1.0/2.0 NW_024969703.1 666501 668206 - uncharacterized LOC122268926 aug3.g25233 NA 7e-58
LOC107456394 Ptep1.0/2.0 NW_024969703.1 975008 997905 + ras-related protein Rab-5C aug3.g25231,aug3.g25230 LOC107456394 0
LOC107456405 Ptep1.0/2.0 NW_024969703.1 1009874 1016908 - uncharacterized LOC107456405 aug3.g25230 LOC107456405 0
LOC107456404 Ptep1.0/2.0 NW_024969703.1 1017051 1033685 + protein FAM133 aug3.g25229 LOC107456404 0
LOC107456407 Ptep1.0/2.0 NW_024969703.1 1046941 1056637 - 40S ribosomal protein S10b aug3.g25228 LOC107456407 0
LOC107456402 Ptep1.0/2.0 NW_024969703.1 1061560 1084096 + slit homolog 1 protein-like aug3.g25227 LOC107456402 0
LOC107456401 Ptep1.0/2.0 NW_024969703.1 1085347 1089219 - serine hydrolase-like protein aug3.g25226 LOC107456401 0
LOC107456362 Ptep1.0/2.0 NW_024969703.1 1113836 1115357 + histone-lysine N-methyltransferase Smyd1-like aug3.g25225 LOC107456362 0
LOC107456398 Ptep1.0/2.0 NW_024969703.1 1123076 1153528 - cell division cycle protein 27 homolog aug3.g25224 LOC107456398 0
LOC107456406 Ptep1.0/2.0 NW_024969703.1 1158528 1169669 + uncharacterized LOC107456406 aug3.g25223 LOC107456406 0
LOC107456397 Ptep1.0/2.0 NW_024969703.1 1210210 1228413 - ras-like protein family member 10B aug3.g25222 LOC107456397 0
LOC107451023 Ptep1.0/2.0 NW_024969780.1 3551413 3582476 + probable serine/threonine-protein kinase dyrk2 aug3.g252 LOC107451023 0
LOC107437870 Ptep1.0/2.0 NW_024969781.1 2274121 2351047 - pseudogene aug3.g25272 LOC107437870,LOC107437863 0
LOC122269439 Ptep1.0/2.0 NW_024969820.1 648357 649184 + uncharacterized LOC122269439 aug3.g25285 NA 0
LOC107456722 Ptep1.0/2.0 NW_024969898.1 2765327 2800339 - extended synaptotagmin-2 aug3.g25297 LOC107456722 0
LOC107456717 Ptep1.0/2.0 NW_024969898.1 2815769 2833200 + protein canopy homolog 2 aug3.g25295 LOC107456717 0
LOC107456721 Ptep1.0/2.0 NW_024969898.1 2841688 2882094 + thyrotropin-releasing hormone-degrading ectoenzyme aug3.g25294 LOC107456721 0
LOC107456707 Ptep1.0/2.0 NW_024969898.1 2905075 2963178 - uncharacterized LOC107456707 aug3.g25292 LOC107456707 0
LOC107456719 Ptep1.0/2.0 NW_024969898.1 2997709 3018101 - protein NCBP2AS2 homolog aug3.g25291 LOC107456719 0
LOC107456709 Ptep1.0/2.0 NW_024969898.1 3042923 3170589 + poly(rC)-binding protein 3-like aug3.g25290,aug3.g25289 LOC107456709 0
LOC107456714 Ptep1.0/2.0 NW_024969898.1 3179953 3216257 - serine hydroxymethyltransferase, mitochondrial aug3.g25288 LOC107456714 0
LOC107456700 Ptep1.0/2.0 NW_024969898.1 3220320 3243849 - protein ABHD11-like aug3.g25287 LOC107456700 0
LOC122268208 Ptep1.0/2.0 NW_024969898.1 3249936 3260996 - protein ABHD11-like aug3.g25284 LOC107456711 0
LOC107456711 Ptep1.0/2.0 NW_024969898.1 3266127 3282795 - protein ABHD11 aug3.g25283 LOC107456711 0
LOC107456710 Ptep1.0/2.0 NW_024969898.1 3285873 3310020 - protein ABHD11 aug3.g25282,aug3.g25283 LOC107456710 0
LOC107449375 Ptep1.0/2.0 NW_024970180.1 394027 395121 + uncharacterized LOC107449375 aug3.g2726,aug3.g25285 LOC107449375 0
LOC122270693 Ptep1.0/2.0 NW_024970320.1 829773 870777 + uncharacterized LOC122270693 aug3.g9818,aug3.g18193,aug3.g15566,aug3.g26714,aug3.g1097,aug3.g19330,aug3.g19261,aug3.g22403,aug3.g16329,aug3.g7403,aug3.g24358,aug3.g9152,aug3.g19188,aug3.g11063,aug3.g8790,aug3.g25600,aug3.g21923,aug3.g27165,aug3.g17253,aug3.g25298 NA 0
LOC110283146 Ptep1.0/2.0 NW_024970438.1 453694 454460 + uncharacterized LOC110283146 aug3.g25278 LOC110283146 3e-138
LOC122270936 Ptep1.0/2.0 NW_024970461.1 659627 661060 - uncharacterized LOC122270936 aug3.g2529 NA 2e-19
LOC122270943 Ptep1.0/2.0 NW_024970464.1 196733 197179 + uncharacterized LOC122270943 aug3.g25285 NA 1e-174
LOC107436443 Ptep1.0/2.0 NW_024970916.1 60984 86261 - pollen-specific leucine-rich repeat extensin-like protein 1 aug3.g11571,aug3.g11210,aug3.g26088,aug3.g16761,aug3.g25216,aug3.g18234 LOC107436443 0
LOC107438888 Ptep1.0/2.0 NW_024971012.1 83778 143941 + neurogenic locus Notch protein-like aug3.g13436,aug3.g25278,aug3.g13437,aug3.g22518,aug3.g19882 LOC107438888,LOC107440282 0
LOC122271867 Ptep1.0/2.0 NW_024971239.1 98239 98973 - uncharacterized LOC122271867 aug3.g25285 NA 0
LOC107456715 Ptep1.0/2.0 NW_024971918.1 10123 43673 + fibrillin-1-like aug3.g25278 LOC107456715 0
LOC107446438 Ptep1.0/2.0 NW_024972283.1 5938 6609 - uncharacterized LOC107446438 aug3.g25281 LOC107446438 0
LOC107456514 Ptep1.0/2.0 NW_024972816.1 6301 12848 + 60S ribosomal protein L12 aug3.g25255 LOC107456514 2e-165
LOC122272802 Ptep1.0/2.0 NW_024972878.1 2936 10289 + uncharacterized LOC122272802 aug3.g25278 LOC107456715 0
LOC122273079 Ptep1.0/2.0 NW_024974005.1 2512 2890 - uncharacterized LOC122273079 aug3.g25281 NA 0
LOC110283143 Ptep1.0/2.0 NW_024974005.1 2951 4201 - uncharacterized LOC110283143 aug3.g25281,aug3.g25280,aug3.g19162 LOC110283143 0
LOC122273384 Ptep1.0/2.0 NW_024975757.1 6469 7877 + uncharacterized LOC122273384 aug3.g25281 NA 4e-85
LOC122273811 Ptep1.0/2.0 NW_024980734.1 913 1524 + sodium/bile acid cotransporter-like aug3.g25269 NA 0
LOC122274096 Ptep1.0/2.0 NW_024991862.1 470 1309 + deoxyribodipyrimidine photo-lyase-like aug3.g2528 NA 9e-162
LOC122268525 Ptep1.0/2.0 NW_024998458.1 510 930 - radixin-like aug3.g25208 NA 7e-116
111 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

[Top] [Home Ptep3.0] [Genes/Transcripts] [BLAST] [Info]
Last updated by Hiroki Oda, 2022.11.02