Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107449016 Ptep1.0/2.0 NW_024969596.1 1405565 1452832 + uncharacterized LOC107449016 aug3.g2534,aug3.g2533 LOC107449016 0
LOC107449017 Ptep1.0/2.0 NW_024969596.1 1462491 1475964 - 1-acyl-sn-glycerol-3-phosphate acyltransferase beta aug3.g2533 LOC107449017 0
LOC122269850 Ptep1.0/2.0 NW_024969952.1 327540 331557 - uncharacterized LOC122269850 aug3.g25330 NA 0
LOC107456954 Ptep1.0/2.0 NW_024969952.1 355998 361075 - uncharacterized LOC107456954 aug3.g25331 LOC107456954 0
LOC122269851 Ptep1.0/2.0 NW_024969952.1 390524 396083 - uncharacterized LOC122269851 aug3.g25332 NA 0
LOC107456968 Ptep1.0/2.0 NW_024969952.1 417555 423590 - peptidyl-prolyl cis-trans isomerase sig-7 aug3.g25334 LOC107456968 0
LOC107456942 Ptep1.0/2.0 NW_024969952.1 432152 435676 + adult-specific rigid cuticular protein 11.9-like aug3.g25335 LOC107456942 0
LOC107456959 Ptep1.0/2.0 NW_024969952.1 438776 459779 - uncharacterized protein DDB_G0290685 aug3.g25336 LOC107456959 0
LOC107456958 Ptep1.0/2.0 NW_024969952.1 459840 487553 + regulation of nuclear pre-mRNA domain-containing protein 2 aug3.g25337 LOC107456958 0
LOC107456962 Ptep1.0/2.0 NW_024969952.1 494753 525107 - probable basic-leucine zipper transcription factor J aug3.g25338 LOC107456962 0
LOC107456952 Ptep1.0/2.0 NW_024969952.1 525320 539633 + protein C1orf43 homolog aug3.g25338,aug3.g24832 LOC107456952 0
LOC107456953 Ptep1.0/2.0 NW_024969952.1 541945 566908 - tyrosine-protein kinase abl-1 aug3.g25339 LOC107456953 0
12 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02