Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107449059 Ptep1.0/2.0 NW_024969739.1 589639 657520 + uncharacterized LOC107449059 aug3.g2564,aug3.g2565 LOC107449059 0
LOC107446742 Ptep1.0/2.0 NW_024969992.1 536799 562687 - gamma-interferon-inducible lysosomal thiol reductase aug3.g25649 LOC107446742 0
LOC107446737 Ptep1.0/2.0 NW_024969992.1 575618 577080 + uncharacterized protein F58A4.6 aug3.g25648 LOC107446737 0
LOC107446795 Ptep1.0/2.0 NW_024969992.1 578403 593799 - bleomycin hydrolase aug3.g25647 LOC107446795 0
LOC107446812 Ptep1.0/2.0 NW_024969992.1 593810 613595 + transcriptional adapter 2-alpha aug3.g25646 LOC107446812 0
LOC107446728 Ptep1.0/2.0 NW_024969992.1 630972 642744 + U7 snRNA-associated Sm-like protein LSm11 aug3.g25645 LOC107446728 0
LOC107446701 Ptep1.0/2.0 NW_024969992.1 650720 671827 + uncharacterized LOC107446701 aug3.g25643 LOC107446701 0
LOC107446770 Ptep1.0/2.0 NW_024969992.1 680785 751760 + cadherin-86C aug3.g25641 LOC107446770 0
LOC107446693 Ptep1.0/2.0 NW_024969992.1 755333 767488 + neprilysin-1-like aug3.g25640 LOC107446693 0
LOC107444875 Ptep1.0/2.0 NW_024969992.1 770452 782328 + endothelin-converting enzyme homolog aug3.g18150,aug3.g25640 LOC107444875 0
LOC107446781 Ptep1.0/2.0 NW_024979512.1 700 2762 + uncharacterized LOC107446781 aug3.g25641 LOC107446781 6e-120
11 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02