Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC122270878 Ptep1.0/2.0 NW_024969634.1 465887 475557 - uncharacterized LOC122270878 aug3.g25671 LOC107448720 0
LOC107448720 Ptep1.0/2.0 NW_024969634.1 478443 558160 - Down syndrome cell adhesion molecule-like protein Dscam2 aug3.g25671 LOC110282555,LOC107448720 0
LOC107448688 Ptep1.0/2.0 NW_024969634.1 594605 596464 - uncharacterized LOC107448688 aug3.g25672 LOC107448688 0
LOC107448733 Ptep1.0/2.0 NW_024969634.1 1108991 1194863 + Down syndrome cell adhesion molecule-like protein Dscam2 aug3.g25674 LOC107448733 0
LOC107438034 Ptep1.0/2.0 NW_024969634.1 1870535 1959833 - Down syndrome cell adhesion molecule-like protein Dscam2 aug3.g26388,aug3.g25674 LOC107438034 0
LOC107439657 Ptep1.0/2.0 NW_024969639.1 276667 486997 - arrestin domain-containing protein 2 aug3.g13936,aug3.g25677 LOC107439657 0
LOC107449452 Ptep1.0/2.0 NW_024969639.1 375628 407700 + uncharacterized LOC107449452 aug3.g25678 LOC107449452 0
LOC107449473 Ptep1.0/2.0 NW_024969639.1 505081 535597 - YTH domain-containing protein 1 aug3.g25680,aug3.g25679 LOC107449473 0
LOC107449074 Ptep1.0/2.0 NW_024970265.1 163267 267540 - inactive dipeptidyl peptidase 10-like aug3.g2567 LOC107449074 0
LOC107455844 Ptep1.0/2.0 NW_024970537.1 289294 289974 - histone-lysine N-methyltransferase SETMAR-like aug3.g8076,aug3.g24783,aug3.g25673,aug3.g24511 LOC107455844 0
LOC107445205 Ptep1.0/2.0 NW_024970894.1 341507 342953 + uncharacterized LOC107445205 aug3.g18375,aug3.g25672,aug3.g27075,aug3.g22895,aug3.g105,aug3.g10018,aug3.g23538,aug3.g2742,aug3.g22145,aug3.g23491,aug3.g25313 LOC107445205 0
LOC107447513 Ptep1.0/2.0 NW_024971284.1 135325 144371 + uncharacterized transmembrane protein DDB_G0281039-like aug3.g25670,aug3.g18658,aug3.g18657,aug3.g25669,aug3.g5199 LOC107447513 0
LOC122273028 Ptep1.0/2.0 NW_024973776.1 2953 6529 + uncharacterized LOC122273028 aug3.g25674 LOC107448733 0
13 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02