Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107449242 Ptep1.0/2.0 NW_024969957.1 2214 21632 + metal cation symporter ZIP14-like aug3.g20645,aug3.g25718 LOC107451769,LOC107449242 0
LOC107451759 Ptep1.0/2.0 NW_024969957.1 22553 44479 - Bardet-Biedl syndrome 2 protein homolog aug3.g25719 LOC107451759 0
LOC107450885 Ptep1.0/2.0 NW_024970109.1 529452 600018 - uncharacterized LOC107450885 aug3.g25717 LOC107450885 0
LOC107450585 Ptep1.0/2.0 NW_024970109.1 726559 738097 - glycine-rich cell wall structural protein 1-like aug3.g25716 LOC107450585 0
LOC107450872 Ptep1.0/2.0 NW_024970109.1 750964 766954 + E3 ubiquitin-protein ligase RAD18 aug3.g25714 LOC107450872 0
LOC107450832 Ptep1.0/2.0 NW_024970489.1 152641 237875 + inositol-pentakisphosphate 2-kinase aug3.g25710 LOC107450832,LOC107436565 0
LOC107450792 Ptep1.0/2.0 NW_024970489.1 237943 289647 - protein BREAST CANCER SUSCEPTIBILITY 1 homolog aug3.g25711 LOC107450792 0
LOC107450863 Ptep1.0/2.0 NW_024970489.1 303566 314488 - postreplication repair E3 ubiquitin-protein ligase RAD18 aug3.g25712 LOC107450863 0
LOC107450848 Ptep1.0/2.0 NW_024970489.1 314589 326026 + postreplication repair E3 ubiquitin-protein ligase rad18 aug3.g25713 LOC107450848 0
LOC122270990 Ptep1.0/2.0 NW_024970489.1 329680 340022 - uncharacterized LOC122270990 aug3.g25714 LOC107450872 0
LOC107449075 Ptep1.0/2.0 NW_024971591.1 40740 60727 - plancitoxin-1 aug3.g2571 LOC107449075 0
11 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02