Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107437924 Ptep1.0/2.0 NW_024969620.1 12652 13332 - uncharacterized LOC107437924 aug3.g12671,aug3.g151,aug3.g4138,aug3.g14158,aug3.g25854,aug3.g18687,aug3.g19606 LOC107437924 0
LOC107457160 Ptep1.0/2.0 NW_024969920.1 1061741 1084481 + protein N-terminal asparagine amidohydrolase aug3.g25850,aug3.g25849 LOC107457160 0
LOC107457168 Ptep1.0/2.0 NW_024969920.1 1087337 1123878 + proline-, glutamic acid- and leucine-rich protein 1 aug3.g25851 LOC107457168 0
LOC107447668 Ptep1.0/2.0 NW_024969920.1 1130613 1147568 + protein bunched, class 2/F/G isoform aug3.g19904,aug3.g25852 LOC107447668 0
LOC107457273 Ptep1.0/2.0 NW_024970169.1 162552 220276 - cGMP-inhibited 3',5'-cyclic phosphodiesterase A aug3.g25859 LOC107457273 0
LOC107457271 Ptep1.0/2.0 NW_024970169.1 221710 277053 - BTB/POZ domain-containing protein 9 aug3.g25858 LOC107457271 0
LOC107457270 Ptep1.0/2.0 NW_024970169.1 285306 299575 + astacin-like metalloprotease toxin 5 aug3.g25857 LOC107457270 0
LOC107457267 Ptep1.0/2.0 NW_024970169.1 328037 348579 + protein arginine N-methyltransferase 1 aug3.g25856 LOC107457267 0
LOC107457266 Ptep1.0/2.0 NW_024970169.1 351042 425563 - ras-related and estrogen-regulated growth inhibitor-like protein aug3.g25855 LOC107457266 0
LOC107457265 Ptep1.0/2.0 NW_024970169.1 469869 497481 - ras-related and estrogen-regulated growth inhibitor-like protein aug3.g25853,aug3.g22719 LOC107457265 0
LOC107449100 Ptep1.0/2.0 NW_024970541.1 16207 234380 + cGMP-specific 3',5'-cyclic phosphodiesterase aug3.g2585,aug3.g2584 LOC107449100 0
LOC122273471 Ptep1.0/2.0 NW_024976374.1 496 2217 + BTB/POZ domain-containing protein 9-like aug3.g25858 LOC107457271 0
12 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02