Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107436156 Ptep1.0/2.0 NW_024969720.1 17772 39225 - arylsulfatase I-like aug3.g25975,aug3.g3616 LOC107436156 0
LOC107436155 Ptep1.0/2.0 NW_024969720.1 63715 94427 - neurotrimin-like aug3.g25974 LOC107436155 0
LOC107436157 Ptep1.0/2.0 NW_024969720.1 132966 137713 - uncharacterized LOC107436157 aug3.g25973,aug3.g17561 LOC107436157 0
LOC107436168 Ptep1.0/2.0 NW_024969720.1 150499 188016 - glutamate receptor ionotropic, kainate 2-like aug3.g25972,aug3.g25971 LOC107436168,LOC107436154 0
LOC107436152 Ptep1.0/2.0 NW_024969720.1 203855 242022 - glutamate receptor ionotropic, kainate 2-like aug3.g25970 LOC107436152 0
LOC107436244 Ptep1.0/2.0 NW_024970095.1 291997 317428 + nucleolar MIF4G domain-containing protein 1 aug3.g25979 LOC107436244 0
LOC107436243 Ptep1.0/2.0 NW_024970095.1 344606 411839 - protein cordon-bleu aug3.g25978 LOC107436243 0
LOC107436249 Ptep1.0/2.0 NW_024970095.1 656322 664871 - uncharacterized LOC107436249 aug3.g25977 LOC107436249 0
LOC107449201 Ptep1.0/2.0 NW_024970804.1 836 39950 - alcohol dehydrogenase class-3 aug3.g2597 LOC107449201 0
9 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02