Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107436329 Ptep1.0/2.0 NW_024970421.1 33556 70981 + CCR4-NOT transcription complex subunit 3 aug3.g26009 LOC107436329 0
LOC107436328 Ptep1.0/2.0 NW_024970421.1 73692 88451 - DCN1-like protein 3 aug3.g26008 LOC107436328 0
LOC107436327 Ptep1.0/2.0 NW_024970421.1 88590 120918 + transmembrane protein 135 aug3.g26007 LOC107436327 0
LOC107436326 Ptep1.0/2.0 NW_024970421.1 121023 263976 - kazrin aug3.g26006 LOC107436326 0
LOC107436318 Ptep1.0/2.0 NW_024970421.1 280600 304915 - protein phosphatase 1 regulatory subunit 7 aug3.g26005 LOC107436318 0
LOC107436325 Ptep1.0/2.0 NW_024970421.1 304812 316449 + enolase aug3.g26004 LOC107436325 0
LOC107436324 Ptep1.0/2.0 NW_024970421.1 319108 331745 + uncharacterized LOC107436324 aug3.g26003 LOC107436324 0
LOC107449198 Ptep1.0/2.0 NW_024970804.1 98732 134441 + uncharacterized protein DDB_G0290685 aug3.g2600 LOC107449198 0
LOC122272649 Ptep1.0/2.0 NW_024972453.1 1089 5048 - uncharacterized LOC122272649 aug3.g26007 NA 0.000000007
9 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02