Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107448190 Ptep1.0/2.0 NW_024969692.1 160411 185703 - uncharacterized LOC107448190 aug3.g2125,aug3.g26305 LOC107448190 0
LOC110282261 Ptep1.0/2.0 NW_024969692.1 185784 191563 - SREBP regulating gene protein aug3.g26305 LOC110282261 0
LOC107437722 Ptep1.0/2.0 NW_024969692.1 191682 206978 + WD40 repeat-containing protein SMU1 aug3.g26306 LOC107437722 0
LOC107437723 Ptep1.0/2.0 NW_024969692.1 213283 260393 - disintegrin and metalloproteinase domain-containing protein 10 aug3.g26307 LOC107437723 0
LOC107437724 Ptep1.0/2.0 NW_024969692.1 260694 279532 + ubiquitin-conjugating enzyme E2-17 kDa aug3.g26308 LOC107437724 0
LOC107437726 Ptep1.0/2.0 NW_024969692.1 298961 776842 - fasciclin-1 aug3.g26309 LOC107437726 0
LOC107437627 Ptep1.0/2.0 NW_024969908.1 2979 10034 + cyclic AMP-dependent transcription factor ATF-4 aug3.g26304 LOC107437627 0
LOC107437626 Ptep1.0/2.0 NW_024969908.1 14862 28602 - protein obstructor-E aug3.g26303 LOC107437626 0
LOC107437625 Ptep1.0/2.0 NW_024969908.1 38971 80370 - serine/arginine repetitive matrix protein 2 aug3.g26302 LOC107437625 0
LOC107437624 Ptep1.0/2.0 NW_024969908.1 108127 125081 + acetyl-coenzyme A transporter 1 aug3.g26301 LOC107437624 0
LOC107437623 Ptep1.0/2.0 NW_024969908.1 128195 159403 + acetyl-coenzyme A transporter 1 aug3.g26300 LOC107437623 0
LOC107449216 Ptep1.0/2.0 NW_024970045.1 446807 460335 - protein AF-9 aug3.g2630 LOC107449216 0
LOC122273428 Ptep1.0/2.0 NW_024976038.1 2216 4761 - uncharacterized LOC122273428 aug3.g26305 LOC107437720 0
13 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02