Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107438284 Ptep1.0/2.0 NW_024969753.1 726093 783612 - RING finger protein nhl-1 aug3.g26445 LOC107438284 0
LOC107438282 Ptep1.0/2.0 NW_024969753.1 793770 809975 + peptidyl-prolyl cis-trans isomerase D aug3.g26444 LOC107438282 0
LOC107438275 Ptep1.0/2.0 NW_024969753.1 815010 819518 + uncharacterized LOC107438275 aug3.g26443 LOC107438275 0
LOC107438280 Ptep1.0/2.0 NW_024969753.1 826290 846730 - NEDD4-binding protein 2 aug3.g26441,aug3.g21843 LOC107438280 0
LOC107438279 Ptep1.0/2.0 NW_024969753.1 847049 966113 + phospholipid-transporting ATPase VA aug3.g26438,aug3.g26437,aug3.g26440 LOC107438279 0
LOC107449243 Ptep1.0/2.0 NW_024969859.1 404911 652523 - kin of IRRE-like protein 1 aug3.g2644 LOC107449243 0
LOC107438270 Ptep1.0/2.0 NW_024969904.1 304535 359769 + unconventional myosin-Id aug3.g26446 LOC107438270 0
LOC107438285 Ptep1.0/2.0 NW_024969904.1 364698 377337 - RWD domain-containing protein 3 aug3.g26447 LOC107438285 0
LOC107438286 Ptep1.0/2.0 NW_024969904.1 377557 423039 + DNA-directed RNA polymerase I subunit RPA2 aug3.g26448 LOC107438286 0
LOC122273796 Ptep1.0/2.0 NW_024980354.1 264 2392 - unconventional myosin-Ig-like aug3.g26446 NA 4e-75
10 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02