Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107438845 Ptep1.0/2.0 NW_024969620.1 1113085 1197481 + histone-lysine N-methyltransferase SMYD3 aug3.g26567 LOC107438845 0
LOC107438842 Ptep1.0/2.0 NW_024969620.1 1153511 1171690 - propionyl-CoA carboxylase beta chain, mitochondrial aug3.g26569 LOC107438842 0
LOC107438841 Ptep1.0/2.0 NW_024969620.1 1200019 1253063 - fibroblast growth factor receptor 4 aug3.g26566,aug3.g26565 LOC107438841 0
LOC107438838 Ptep1.0/2.0 NW_024969620.1 1268285 1277517 - endoplasmic reticulum chaperone BiP aug3.g26564 LOC107438838 0
LOC107438839 Ptep1.0/2.0 NW_024969620.1 1280999 1284682 - NADPH-dependent diflavin oxidoreductase 1-like aug3.g26563 LOC107438839 0
LOC107438837 Ptep1.0/2.0 NW_024969620.1 1284840 1307305 + uncharacterized LOC107438837 aug3.g26561 LOC107438837 0
LOC107438836 Ptep1.0/2.0 NW_024969620.1 1317647 1343704 - SPARC aug3.g26560 LOC107438836 0
LOC107449255 Ptep1.0/2.0 NW_024969640.1 405115 426816 + RNA-binding protein Nova-1 aug3.g2656 LOC107449255 0
8 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02