Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107439319 Ptep1.0/2.0 NW_024969824.1 122393 124184 + piggyBac transposable element-derived protein 3-like aug3.g26766 LOC107439319 0
LOC107439320 Ptep1.0/2.0 NW_024969824.1 198564 278281 - carboxylesterase aug3.g26768 LOC107439337,LOC107439320 0
LOC122269458 Ptep1.0/2.0 NW_024969824.1 390178 391278 + BEN domain-containing protein 5-like aug3.g26769 NA 1e-158
LOC122269733 Ptep1.0/2.0 NW_024969910.1 886556 887415 - uncharacterized LOC122269733 aug3.g26763 NA 0
LOC107449306 Ptep1.0/2.0 NW_024969926.1 761605 788567 - CTD nuclear envelope phosphatase 1 aug3.g2676 LOC107449306 0
LOC122271645 Ptep1.0/2.0 NW_024971018.1 7090 7482 + piggyBac transposable element-derived protein 1-like aug3.g26766 NA 4e-114
LOC122273259 Ptep1.0/2.0 NW_024975058.1 849 1879 - uncharacterized LOC122273259 aug3.g26763 NA 0
7 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02