Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107442106 Ptep1.0/2.0 NW_024969652.1 1243790 1288470 - CTTNBP2 N-terminal-like protein aug3.g27099,aug3.g27533,aug3.g27532 LOC107442106,LOC107440541 0
LOC122270150 Ptep1.0/2.0 NW_024970071.1 337096 338943 - tigger transposable element-derived protein 4-like aug3.g26587,aug3.g27097 NA 0
LOC107440550 Ptep1.0/2.0 NW_024970393.1 91423 98123 + uncharacterized LOC107440550 aug3.g27089,aug3.g27098 LOC107440550 0
LOC107440543 Ptep1.0/2.0 NW_024970393.1 150287 160358 + putative uncharacterized protein DDB_G0290521 aug3.g27091 LOC107440543 0
LOC107440538 Ptep1.0/2.0 NW_024970393.1 214735 322275 - F-box/LRR-repeat protein 7 aug3.g27093 LOC107440538 0
LOC107440539 Ptep1.0/2.0 NW_024970393.1 338669 374857 - transforming growth factor beta receptor type 3 aug3.g27094 LOC107440539 0
LOC107440540 Ptep1.0/2.0 NW_024970393.1 375042 382279 + single-strand selective monofunctional uracil DNA glycosylase aug3.g27095,aug3.g27096 LOC107440540 0
LOC122270836 Ptep1.0/2.0 NW_024970393.1 403215 411088 - uncharacterized LOC122270836 aug3.g27098 NA 0
LOC107449346 Ptep1.0/2.0 NW_024970471.1 701854 733428 - uncharacterized LOC107449346 aug3.g2709 LOC107449346 0
LOC122273764 Ptep1.0/2.0 NW_024979844.1 1761 2457 + tigger transposable element-derived protein 4-like aug3.g27097 NA 0
10 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02