Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107440814 Ptep1.0/2.0 NW_024969740.1 796249 1447467 + pseudouridine-metabolizing bifunctional protein C1861.05 aug3.g27169,aug3.g27160,aug3.g27167,aug3.g27163 LOC107440814 0
LOC107440815 Ptep1.0/2.0 NW_024969740.1 831424 847182 - uncharacterized LOC107440815 aug3.g27168 LOC107440815 0
LOC107440819 Ptep1.0/2.0 NW_024969740.1 884927 1116215 - tetraspanin-9-like aug3.g27166 LOC107440819 0
LOC107440818 Ptep1.0/2.0 NW_024969740.1 1397511 1405818 - uncharacterized LOC107440818 aug3.g27162 LOC107440818 0
LOC107440817 Ptep1.0/2.0 NW_024969740.1 1410323 1437708 - uncharacterized LOC107440817 aug3.g27161 LOC107440817 0
LOC122270693 Ptep1.0/2.0 NW_024970320.1 829773 870777 + uncharacterized LOC122270693 aug3.g9818,aug3.g18193,aug3.g15566,aug3.g26714,aug3.g1097,aug3.g19330,aug3.g19261,aug3.g22403,aug3.g16329,aug3.g7403,aug3.g24358,aug3.g9152,aug3.g19188,aug3.g11063,aug3.g8790,aug3.g25600,aug3.g21923,aug3.g27165,aug3.g17253,aug3.g25298 NA 0
LOC107449342 Ptep1.0/2.0 NW_024970471.1 264930 333518 - synaptotagmin 1 aug3.g2716 LOC107449342 0
7 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02