Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC122269080 Ptep1.0/2.0 NW_024969732.1 1028038 1044390 + uncharacterized LOC122269080 aug3.g27271 NA 3e-91
LOC107441353 Ptep1.0/2.0 NW_024969732.1 1039123 1078781 - transmembrane 9 superfamily member 1 aug3.g27271,aug3.g27270 LOC107441353 0
LOC107441355 Ptep1.0/2.0 NW_024969732.1 1078900 1093281 + uncharacterized LOC107441355 aug3.g27272 LOC107441355 0
LOC107441356 Ptep1.0/2.0 NW_024969732.1 1106972 1133276 + brain tumor protein aug3.g27273 LOC107441356 0
LOC122269082 Ptep1.0/2.0 NW_024969732.1 1138143 1147424 - deleted in malignant brain tumors 1 protein-like aug3.g27274 NA 0
LOC107441357 Ptep1.0/2.0 NW_024969732.1 1150373 1333014 - cubilin aug3.g27274,aug3.g9850 LOC107441357,LOC110282294 0
LOC107449376 Ptep1.0/2.0 NW_024970180.1 233570 388542 - cAMP-specific 3',5'-cyclic phosphodiesterase, isoforms N/G aug3.g2729,aug3.g2727 LOC107449376 0
LOC107441410 Ptep1.0/2.0 NW_024970641.1 122669 152758 + amidophosphoribosyltransferase aug3.g27279 LOC107441410 0
LOC107441409 Ptep1.0/2.0 NW_024970641.1 155127 164356 - xaa-Pro aminopeptidase 3 aug3.g27278 LOC107441409 0
LOC107441408 Ptep1.0/2.0 NW_024970641.1 185713 249425 + prostaglandin D2 receptor-like aug3.g27277 LOC107441408 0
LOC107436421 Ptep1.0/2.0 NW_024971047.1 47470 48656 + uncharacterized LOC107436421 aug3.g27275 LOC107436421 2e-115
LOC107441406 Ptep1.0/2.0 NW_024971166.1 58212 95218 + uncharacterized LOC107441406 aug3.g27275 LOC107441406 0
LOC107441407 Ptep1.0/2.0 NW_024971166.1 105898 122703 - receptor expression-enhancing protein 5 aug3.g27276 LOC107441407 0
LOC122273354 Ptep1.0/2.0 NW_024975623.1 990 4139 + bone morphogenetic protein 1 homolog aug3.g27274 LOC110281928 0
LOC122274123 Ptep1.0/2.0 NW_024993414.1 14 876 + uncharacterized LOC122274123 aug3.g27275 NA 1e-102
15 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02