Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107441404 Ptep1.0/2.0 NW_024969603.1 1877776 1991506 - uncharacterized LOC107441404 aug3.g27292 LOC107441404 0
LOC107441405 Ptep1.0/2.0 NW_024969603.1 2226631 2241622 - uncharacterized LOC107441405 aug3.g27291 LOC107441405 0
LOC107441420 Ptep1.0/2.0 NW_024969603.1 2249313 2287439 + telomere length regulation protein TEL2 homolog aug3.g27290 LOC107441420 0
LOC107441478 Ptep1.0/2.0 NW_024970010.1 79961 212868 + kinesin-like protein KIF13A aug3.g27300,aug3.g27299 LOC107441478,LOC107453703 0
LOC107441476 Ptep1.0/2.0 NW_024970010.1 215701 259594 - transcriptional repressor CTCF aug3.g27298 LOC107441476 0
LOC107441475 Ptep1.0/2.0 NW_024970010.1 262089 287711 - bromodomain-containing protein 7 aug3.g27297 LOC107441475 0
LOC107441474 Ptep1.0/2.0 NW_024970010.1 291822 296564 + actin-like protein 6B aug3.g27296 LOC107441474 0
LOC107441470 Ptep1.0/2.0 NW_024970010.1 314340 467670 - voltage-dependent T-type calcium channel subunit alpha-1G aug3.g27295 LOC107441470 0
LOC107441473 Ptep1.0/2.0 NW_024970010.1 529023 529566 + adult-specific rigid cuticular protein 12.6 aug3.g27293 LOC107441473 0
LOC107449376 Ptep1.0/2.0 NW_024970180.1 233570 388542 - cAMP-specific 3',5'-cyclic phosphodiesterase, isoforms N/G aug3.g2729,aug3.g2727 LOC107449376 0
LOC107442934 Ptep1.0/2.0 NW_024970496.1 314062 316084 - gastrula zinc finger protein XlCGF49.1-like aug3.g27296 LOC107442934 1e-71
LOC122273049 Ptep1.0/2.0 NW_024973851.1 5792 9531 + uncharacterized LOC122273049 aug3.g27296 NA 2e-34
12 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02