Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107449408 Ptep1.0/2.0 NW_024969596.1 2438213 2463424 - ras-related protein Rap-1b aug3.g2754 LOC107449408 0
LOC122269995 Ptep1.0/2.0 NW_024970004.1 2055 28001 - elongation of very long chain fatty acids protein 4-like aug3.g27549,aug3.g27550 NA 0
LOC107449289 Ptep1.0/2.0 NW_024970126.1 530018 531418 + uncharacterized LOC107449289 aug3.g2662,aug3.g19973,aug3.g15317,aug3.g14203,aug3.g13435,aug3.g26558,aug3.g27548 LOC107449289 0
LOC107442140 Ptep1.0/2.0 NW_024970533.1 75784 121219 + solute carrier organic anion transporter family member 74D aug3.g27540 LOC107442140 0
LOC107442145 Ptep1.0/2.0 NW_024970533.1 123745 181343 - solute carrier organic anion transporter family member 74D aug3.g27542,aug3.g27543 LOC107442145 0
LOC107442146 Ptep1.0/2.0 NW_024970533.1 214226 252796 - solute carrier organic anion transporter family member 74D aug3.g27544 LOC107442146 0
LOC107442153 Ptep1.0/2.0 NW_024970533.1 262129 289512 - elongation of very long chain fatty acids protein 7-like aug3.g27545 LOC107442153 0
LOC107442150 Ptep1.0/2.0 NW_024972252.1 1983 26970 + elongation of very long chain fatty acids protein 4-like aug3.g27549,aug3.g27545 LOC107442150 0
8 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02