Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107442817 Ptep1.0/2.0 NW_024969860.1 15586 22920 - uncharacterized LOC107442817 aug3.g27757 LOC107442817 0
LOC107442815 Ptep1.0/2.0 NW_024969860.1 81965 113541 + neurotrimin-like aug3.g27755 LOC107442815 0
LOC107442811 Ptep1.0/2.0 NW_024969860.1 255070 491454 + lachesin aug3.g27754 LOC107442811 0
LOC107442814 Ptep1.0/2.0 NW_024969860.1 711169 719165 + phospholipase A2 aug3.g27753 LOC107442814 0
LOC107442813 Ptep1.0/2.0 NW_024969860.1 823684 850774 - uncharacterized LOC107442813 aug3.g27752 LOC107442813 0
LOC122269551 Ptep1.0/2.0 NW_024969860.1 871034 876026 - uncharacterized LOC122269551 aug3.g27751 NA 0
LOC107442818 Ptep1.0/2.0 NW_024969860.1 878246 882994 - putative lipoyltransferase 2, mitochondrial aug3.g27751 LOC107442818 0
LOC107449442 Ptep1.0/2.0 NW_024970449.1 228807 268925 + UDP-galactose/UDP-glucose transporter 7 aug3.g2775 LOC107449442 0
LOC122271236 Ptep1.0/2.0 NW_024970655.1 10258 11228 - uncharacterized LOC122271236 aug3.g27750 NA 0
LOC107442875 Ptep1.0/2.0 NW_024971098.1 43911 47767 + prostatic spermine-binding protein-like aug3.g27759 LOC107442875 0
LOC107442885 Ptep1.0/2.0 NW_024971098.1 50687 126466 - coiled-coil domain-containing protein CG32809 aug3.g27758 LOC107442885 0
LOC107442810 Ptep1.0/2.0 NW_024971955.1 1263 2835 + uncharacterized LOC107442810 aug3.g27750,aug3.g8333 LOC107442810 0
12 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02