Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107442922 Ptep1.0/2.0 NW_024969751.1 55084 226311 + Down syndrome cell adhesion molecule-like protein Dscam2 aug3.g27791 LOC107442922 0
LOC122269153 Ptep1.0/2.0 NW_024969751.1 438838 448927 - kinesin-like protein KIF20B aug3.g27792 NA 0
LOC122269154 Ptep1.0/2.0 NW_024969751.1 452461 460581 - uncharacterized LOC122269154 aug3.g27792 LOC107442918 0
LOC107442918 Ptep1.0/2.0 NW_024969751.1 474679 492517 - cilia- and flagella-associated protein 57-like aug3.g27792 LOC107442918 0
LOC107442920 Ptep1.0/2.0 NW_024969751.1 568093 574326 + thioredoxin domain-containing protein 9 aug3.g27793 LOC107442920 0
LOC107442921 Ptep1.0/2.0 NW_024969751.1 576718 581596 + CDGSH iron-sulfur domain-containing protein 1 aug3.g27794 LOC107442921 0
LOC107448779 Ptep1.0/2.0 NW_024969751.1 587974 637327 + disks large homolog 5 aug3.g20451,aug3.g27795,aug3.g20452 LOC107448779 0
LOC107449441 Ptep1.0/2.0 NW_024970449.1 321270 342741 - probable cysteine--tRNA ligase, mitochondrial aug3.g2779 LOC107449441 0
LOC107442949 Ptep1.0/2.0 NW_024970849.1 620245 648989 - corticotropin-releasing factor-binding protein aug3.g27796,aug3.g13458 LOC107442949 0
LOC107442959 Ptep1.0/2.0 NW_024970849.1 665274 684079 - inositol monophosphatase 1 aug3.g27798,aug3.g27797 LOC107442959 0
LOC107442958 Ptep1.0/2.0 NW_024970849.1 684199 708966 + coiled-coil domain-containing protein 102A aug3.g27799 LOC107442958 0
LOC122271813 Ptep1.0/2.0 NW_024971179.1 11307 13423 - uncharacterized LOC122271813 aug3.g18247,aug3.g27790,aug3.g12483 NA 0
12 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02