Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107443113 Ptep1.0/2.0 NW_024969894.1 13569 69674 + uncharacterized LOC107443113 aug3.g27856 LOC107443113 0
LOC107443115 Ptep1.0/2.0 NW_024969894.1 69779 97784 - poly(A) RNA polymerase GLD2 aug3.g27855 LOC107443115 0
LOC107443114 Ptep1.0/2.0 NW_024969894.1 97910 118081 + uncharacterized LOC107443114 aug3.g27854 LOC107443114 0
LOC107443123 Ptep1.0/2.0 NW_024969894.1 122136 133551 + dolichol kinase aug3.g27853 LOC107443123 0
LOC107443119 Ptep1.0/2.0 NW_024969894.1 135782 161750 - mucosa-associated lymphoid tissue lymphoma translocation protein 1 aug3.g27852 LOC107443119,LOC107444731 0
LOC107443109 Ptep1.0/2.0 NW_024969894.1 163545 174028 + von Willebrand factor A domain-containing protein 8 aug3.g27851 LOC107443109 0
LOC107443107 Ptep1.0/2.0 NW_024969894.1 174388 229953 - guanine nucleotide exchange factor subunit RIC1 aug3.g27850 LOC110282962,LOC107443107 0
LOC107441835 Ptep1.0/2.0 NW_024970143.1 1597100 1627739 + uncharacterized LOC107441835 aug3.g16173,aug3.g16172,aug3.g16174,aug3.g16171,aug3.g15412,aug3.g2785,aug3.g16613 LOC107441835 0
LOC122270336 Ptep1.0/2.0 NW_024970143.1 1681759 1687704 - uncharacterized LOC122270336 aug3.g2785 NA 0
LOC107449457 Ptep1.0/2.0 NW_024970143.1 1699657 1705105 - uncharacterized LOC107449457 aug3.g2785 LOC107449457 0
LOC107443172 Ptep1.0/2.0 NW_024971180.1 82325 116514 - phosphofurin acidic cluster sorting protein 1 aug3.g27859 LOC107443172 0
LOC107445561 Ptep1.0/2.0 NW_024971854.1 6673 7706 - guanine nucleotide exchange factor subunit Rich-like aug3.g27850 LOC107445561 4e-94
LOC122272729 Ptep1.0/2.0 NW_024972650.1 12103 15901 - uncharacterized LOC122272729 aug3.g27850 NA 1e-66
13 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02