Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107443403 Ptep1.0/2.0 NW_024969614.1 1688777 1758375 - polyamine-transporting ATPase 13A3 aug3.g27957,aug3.g21140 LOC107443403 0
LOC107443406 Ptep1.0/2.0 NW_024969614.1 1762802 1783571 - interleukin enhancer-binding factor 2 homolog aug3.g27956 LOC107443406 0
LOC107443408 Ptep1.0/2.0 NW_024969614.1 1788481 1843462 - uncharacterized LOC107443408 aug3.g27955 LOC107443408 0
LOC107443407 Ptep1.0/2.0 NW_024969614.1 1849298 1863171 - 3-hydroxyacyl-CoA dehydrogenase type-2 aug3.g27954 LOC107443407 0
LOC107443400 Ptep1.0/2.0 NW_024969614.1 1864840 1879420 - 3-hydroxyacyl-CoA dehydrogenase type-2-like aug3.g27953 LOC107443400 0
LOC107443405 Ptep1.0/2.0 NW_024969614.1 1888642 2021257 + mitochondrial inner membrane protease subunit 2 aug3.g27952 LOC107443405 0
LOC122269723 Ptep1.0/2.0 NW_024969614.1 2247663 2248031 + histone-lysine N-methyltransferase SETMAR-like aug3.g27948 NA 0
LOC122269935 Ptep1.0/2.0 NW_024969616.1 2267348 2267962 + histone-lysine N-methyltransferase SETMAR-like aug3.g2791 NA 0
LOC107452617 Ptep1.0/2.0 NW_024969646.1 1511462 1596907 - G protein-coupled receptor kinase 2 aug3.g279 LOC107452617 0
LOC122268735 Ptep1.0/2.0 NW_024969665.1 708755 711787 + uncharacterized LOC122268735 aug3.g26016,aug3.g5006,aug3.g20683,aug3.g2786,aug3.g26717,aug3.g10174,aug3.g14253,aug3.g462,aug3.g384,aug3.g18711,aug3.g14703,aug3.g24087,aug3.g27923,aug3.g4590,aug3.g1290,aug3.g410,aug3.g22180,aug3.g97,aug3.g3486,aug3.g27744,aug3.g7211,aug3.g22976 NA 0
LOC107451821 Ptep1.0/2.0 NW_024969695.1 707476 740616 + beta-glucuronidase-like aug3.g27959,aug3.g21610,aug3.g27958 LOC107451821 0
LOC107443442 Ptep1.0/2.0 NW_024969695.1 740463 782191 - intraflagellar transport protein 20 homolog aug3.g27959 LOC107443442 0
LOC107443444 Ptep1.0/2.0 NW_024969695.1 843725 867574 - protein RCC2 homolog aug3.g27960 LOC107443444 0
LOC107443436 Ptep1.0/2.0 NW_024969695.1 874414 898648 - uncharacterized LOC107443436 aug3.g27961 LOC107443436 0
LOC107443445 Ptep1.0/2.0 NW_024969695.1 899783 931419 + protein IWS1 homolog aug3.g27963,aug3.g21619 LOC107451870,LOC107443445 0
LOC107443440 Ptep1.0/2.0 NW_024969695.1 1241774 1316295 - RYamide receptor-like aug3.g27968 LOC107443440 0
LOC107443336 Ptep1.0/2.0 NW_024969752.1 3631075 3920034 + microtubule-actin cross-linking factor 1 aug3.g27926,aug3.g27927,aug3.g6087 LOC107443336,LOC107454188 0
LOC107443343 Ptep1.0/2.0 NW_024969752.1 3928314 3949215 + G patch domain-containing protein 2 aug3.g27928 LOC107443343 0
LOC122269163 Ptep1.0/2.0 NW_024969752.1 3966833 3972699 + uncharacterized LOC122269163 aug3.g27930 NA 0
LOC107443341 Ptep1.0/2.0 NW_024969752.1 3989349 4008595 + U1 small nuclear ribonucleoprotein A aug3.g27931 LOC107443341 0
LOC107443348 Ptep1.0/2.0 NW_024969752.1 4012923 4026455 - myoneurin aug3.g27932 LOC107443348 0
LOC107443346 Ptep1.0/2.0 NW_024969752.1 4029259 4040768 - facilitated trehalose transporter Tret1 aug3.g27933 LOC107443346 0
LOC107443344 Ptep1.0/2.0 NW_024969752.1 4054722 4062793 + facilitated trehalose transporter Tret1 aug3.g27934 LOC107443344 0
LOC107443339 Ptep1.0/2.0 NW_024969752.1 4070855 4076820 + uncharacterized LOC107443339 aug3.g27935 LOC107443339 0
LOC107443338 Ptep1.0/2.0 NW_024969752.1 4079651 4085331 - uncharacterized protein DDB_G0283357 aug3.g27936 LOC107443338 0
LOC107443347 Ptep1.0/2.0 NW_024969752.1 4100032 4119102 + adenylyl cyclase-associated protein 2 aug3.g27937 LOC107443347 0
LOC107443340 Ptep1.0/2.0 NW_024969752.1 4128869 4165709 - trithorax group protein osa aug3.g27938 LOC107443340 0
LOC107443345 Ptep1.0/2.0 NW_024969752.1 4288679 4298240 + uncharacterized LOC107443345 aug3.g27939 LOC107443345 0
LOC107443351 Ptep1.0/2.0 NW_024969752.1 4308302 4328627 + transmembrane protein 272 aug3.g27941,aug3.g27940 LOC107443351 0
LOC107443352 Ptep1.0/2.0 NW_024969752.1 4340172 4387865 - protein goliath aug3.g27942 LOC107443352 0
LOC107443337 Ptep1.0/2.0 NW_024969752.1 4398081 4444890 - uncharacterized LOC107443337 aug3.g27943 LOC107443337 0
LOC107443350 Ptep1.0/2.0 NW_024969752.1 4461876 4479430 - torsin-1A aug3.g27944 LOC107443350 0
LOC107443342 Ptep1.0/2.0 NW_024969752.1 4489422 4501687 - uncharacterized LOC107443342 aug3.g27945 LOC107443342 0
LOC110283395 Ptep1.0/2.0 NW_024969752.1 4518706 4548635 - uncharacterized LOC110283395 aug3.g27947 LOC110283395 0
LOC107444016 Ptep1.0/2.0 NW_024969765.1 348765 408470 - uncharacterized LOC107444016 aug3.g17613,aug3.g23084,aug3.g5536,aug3.g715,aug3.g12559,aug3.g4135,aug3.g10940,aug3.g27929,aug3.g11329,aug3.g5784,aug3.g21693,aug3.g18243,aug3.g1982,aug3.g24226,aug3.g7007,aug3.g691,aug3.g4537,aug3.g23563,aug3.g20932,aug3.g1220,aug3.g2490,aug3.g14337,aug LOC107444016,LOC107438385 0
LOC107438137 Ptep1.0/2.0 NW_024969793.1 699616 824568 + formin-J-like aug3.g26411,aug3.g15945,aug3.g16965,aug3.g18789,aug3.g3845,aug3.g20638,aug3.g27431,aug3.g11569,aug3.g26749,aug3.g13556,aug3.g568,aug3.g15812,aug3.g22828,aug3.g12149,aug3.g5637,aug3.g892,aug3.g8296,aug3.g18962,aug3.g6082,aug3.g24558,aug3.g9808,aug3.g2790,a LOC107438137 0
LOC107443486 Ptep1.0/2.0 NW_024969840.1 137924 183182 + carbonyl reductase [NADPH] 1 aug3.g20755,aug3.g27989,aug3.g27990 LOC107443486 0
LOC107443485 Ptep1.0/2.0 NW_024969840.1 184406 200879 + carbonyl reductase [NADPH] 3-like aug3.g27988 LOC107443485 0
LOC107443491 Ptep1.0/2.0 NW_024969840.1 209037 212483 - uncharacterized LOC107443491 aug3.g27987,aug3.g17748,aug3.g17746,aug3.g17747,aug3.g21211,aug3.g17627 LOC107443491 0
LOC107443484 Ptep1.0/2.0 NW_024969840.1 217841 261634 - nostrin aug3.g27986 LOC107443484 0
LOC107443494 Ptep1.0/2.0 NW_024969840.1 326519 354018 + prostaglandin E synthase 3 aug3.g27985 LOC107443494 0
LOC107443480 Ptep1.0/2.0 NW_024969840.1 374494 376775 - poly [ADP-ribose] polymerase tankyrase-2-like aug3.g27984 LOC107443480 0
LOC107443502 Ptep1.0/2.0 NW_024969840.1 376907 384226 + transcriptional protein SWT1 aug3.g27983 LOC107443502 0
LOC107443493 Ptep1.0/2.0 NW_024969840.1 402166 407245 - actin, clone 403 aug3.g27982,aug3.g10784,aug3.g10783 LOC107443493 0
LOC107443504 Ptep1.0/2.0 NW_024969840.1 502275 512580 + U5 small nuclear ribonucleoprotein 40 kDa protein aug3.g27980 LOC107443504 0
LOC107443498 Ptep1.0/2.0 NW_024969840.1 517202 553153 + protein PHTF2 aug3.g27979 LOC107443498,LOC107443492 0
LOC107443501 Ptep1.0/2.0 NW_024969840.1 561537 594763 + myotubularin-related protein 14 aug3.g27978,aug3.g22251 LOC107443501 0
LOC107443495 Ptep1.0/2.0 NW_024969840.1 597703 666340 + myocyte-specific enhancer factor 2C aug3.g27977 LOC107443495 0
LOC107443497 Ptep1.0/2.0 NW_024969840.1 673089 685445 - vesicle transport protein USE1 aug3.g27976 LOC107443497 0
LOC107443496 Ptep1.0/2.0 NW_024969840.1 685548 692735 + retinol dehydrogenase 14-like aug3.g27975 LOC107443496 0
LOC107443482 Ptep1.0/2.0 NW_024969840.1 697331 753183 - sodium-independent sulfate anion transporter aug3.g27974 LOC107443482 0
LOC107443488 Ptep1.0/2.0 NW_024969840.1 780870 828508 - myosin heavy chain, muscle aug3.g27973 LOC107443488 0
LOC107443481 Ptep1.0/2.0 NW_024969840.1 852816 875058 + uncharacterized LOC107443481 aug3.g27971 LOC107443481 0
LOC107443489 Ptep1.0/2.0 NW_024969840.1 895764 931589 + uncharacterized LOC107443489 aug3.g27970 LOC107443489 0
LOC107443490 Ptep1.0/2.0 NW_024969840.1 938694 946237 - 40S ribosomal protein SA aug3.g27969 LOC107443490 0
LOC107443293 Ptep1.0/2.0 NW_024969999.1 26499 282775 - protein slit aug3.g27924 LOC107443293 0
LOC107443292 Ptep1.0/2.0 NW_024969999.1 326492 336384 - zinc finger protein 888 aug3.g27922 LOC107443292 4e-134
LOC122269972 Ptep1.0/2.0 NW_024969999.1 328631 331719 - uncharacterized LOC122269972 aug3.g27921 NA 0
LOC107443291 Ptep1.0/2.0 NW_024969999.1 347882 356813 - uncharacterized LOC107443291 aug3.g27920 LOC107443291 3e-97
LOC122268306 Ptep1.0/2.0 NW_024969999.1 364445 388585 - zinc finger protein 555-like aug3.g27918 NA 1e-111
LOC110282106 Ptep1.0/2.0 NW_024969999.1 392866 426293 - zinc finger protein 883 aug3.g27918 LOC110282106 7e-177
LOC122269970 Ptep1.0/2.0 NW_024969999.1 428198 442293 - protein krueppel-like aug3.g27916,aug3.g27915 NA 9e-133
LOC122269973 Ptep1.0/2.0 NW_024969999.1 452152 454794 - uncharacterized LOC122269973 aug3.g27914 NA 0
LOC107443311 Ptep1.0/2.0 NW_024969999.1 472797 476290 - uncharacterized LOC107443311 aug3.g27913 LOC107443311 0
LOC107443288 Ptep1.0/2.0 NW_024969999.1 476552 477259 + gastrula zinc finger protein XlCGF49.1 aug3.g27912 LOC107443288 0
LOC107445456 Ptep1.0/2.0 NW_024969999.1 484725 494577 - hydroxyacyl-coenzyme A dehydrogenase, mitochondrial aug3.g27911,aug3.g24744 LOC107445456,LOC107443306 0
LOC107443287 Ptep1.0/2.0 NW_024969999.1 506440 578821 + transient receptor potential cation channel subfamily M member 2 aug3.g27910 LOC107443287 0
LOC107443281 Ptep1.0/2.0 NW_024969999.1 589408 606258 + cystathionine gamma-lyase-like aug3.g27909 LOC107443281 0
LOC107438734 Ptep1.0/2.0 NW_024970068.1 51087 76069 + pseudogene aug3.g25316,aug3.g4225,aug3.g8566,aug3.g4223,aug3.g23367,aug3.g6833,aug3.g3011,aug3.g13548,aug3.g26700,aug3.g7541,aug3.g17201,aug3.g12975,aug3.g3889,aug3.g2792 LOC107438734 0
LOC107443305 Ptep1.0/2.0 NW_024970154.1 33 28566 + RNA-dependent RNA polymerase 1 aug3.g27925 LOC107443305 0
LOC122270376 Ptep1.0/2.0 NW_024970154.1 35301 74816 - protein slit-like aug3.g27924 LOC107443293 0
LOC107440440 Ptep1.0/2.0 NW_024970287.1 162228 313934 + obscurin aug3.g14538,aug3.g10153,aug3.g11641,aug3.g21795,aug3.g27538,aug3.g12171,aug3.g5376,aug3.g73,aug3.g11444,aug3.g27910,aug3.g21863 LOC107452771,LOC107440440,LOC107436545,LOC110283129,LOC107445803 0
LOC107440396 Ptep1.0/2.0 NW_024970304.1 152132 177266 + pancreatic lipase-related protein 2-like aug3.g20849,aug3.g10123,aug3.g2796 LOC107440396 0
LOC107449466 Ptep1.0/2.0 NW_024970367.1 353961 354539 + histone-lysine N-methyltransferase SETMAR-like aug3.g2791 LOC107449466 0
LOC107449465 Ptep1.0/2.0 NW_024970633.1 184365 195472 + sulfotransferase ssu-1-like aug3.g2793,aug3.g2795,aug3.g15732 LOC107449465 0
LOC107449467 Ptep1.0/2.0 NW_024970633.1 203805 211307 + sulfotransferase ssu-1-like aug3.g2795,aug3.g2794 LOC107449467 0
LOC122268280 Ptep1.0/2.0 NW_024970633.1 210202 221950 + sulfotransferase ssu-1-like aug3.g2795 NA 0
LOC107443294 Ptep1.0/2.0 NW_024970755.1 927 66684 + sodium-dependent phosphate transport protein 1-like aug3.g27900,aug3.g27899 LOC107443294 0
LOC107443307 Ptep1.0/2.0 NW_024970755.1 18226 29154 + putative inorganic phosphate cotransporter aug3.g27900 LOC107443307 0
LOC107443283 Ptep1.0/2.0 NW_024970755.1 78667 90723 + putative inorganic phosphate cotransporter aug3.g27900 LOC107443283 0
LOC122271365 Ptep1.0/2.0 NW_024970755.1 95223 99584 + putative inorganic phosphate cotransporter aug3.g27900 NA 0
LOC107443284 Ptep1.0/2.0 NW_024970755.1 102087 112835 + uncharacterized LOC107443284 aug3.g27900 LOC107443284 3e-137
LOC107443282 Ptep1.0/2.0 NW_024970755.1 114181 141333 + sialin-like aug3.g27901,aug3.g27902 LOC107443282 0
LOC107443285 Ptep1.0/2.0 NW_024970755.1 141427 169920 + uncharacterized transporter slc-17.2-like aug3.g27903 LOC107443285 0
LOC107443295 Ptep1.0/2.0 NW_024970755.1 171546 177310 - serum amyloid A-5 protein-like aug3.g27904 LOC107443295 0
LOC107443303 Ptep1.0/2.0 NW_024970755.1 190076 216348 + transmembrane protein 164 aug3.g27906,aug3.g27907 LOC107443303 0
LOC107443310 Ptep1.0/2.0 NW_024970755.1 221500 275716 - large neutral amino acids transporter small subunit 2-like aug3.g27907 LOC107443310 0
LOC107439500 Ptep1.0/2.0 NW_024971188.1 12966 45473 - probable RNA-dependent RNA polymerase SHL2 aug3.g13818,aug3.g27925 LOC107439500 0
LOC107437465 Ptep1.0/2.0 NW_024972101.1 14006 14662 + histone-lysine N-methyltransferase SETMAR aug3.g12333,aug3.g2791,aug3.g27917 LOC107437465 0
LOC110282338 Ptep1.0/2.0 NW_024972583.1 50106 52569 - putative leucine-rich repeat-containing protein DDB_G0290503 aug3.g2621,aug3.g27905 LOC110282338 0
LOC107443500 Ptep1.0/2.0 NW_024974100.1 610 8091 - carbonyl reductase [NADPH] 1 aug3.g27989 LOC107443500 0
LOC107449507 Ptep1.0/2.0 NW_024976460.1 2059 4870 + uncharacterized LOC107449507 aug3.g5459,aug3.g27908 LOC107449507 0
LOC122273498 Ptep1.0/2.0 NW_024976682.1 2620 4382 + 3-hydroxyacyl-CoA dehydrogenase type-2-like aug3.g27954 LOC107443407 1e-154
LOC122274084 Ptep1.0/2.0 NW_024990693.1 58 1128 + histone-lysine N-methyltransferase SETMAR-like aug3.g2791,aug3.g13597,aug3.g5401 NA 0
LOC122268515 Ptep1.0/2.0 NW_024997656.1 443 1049 - uncharacterized LOC122268515 aug3.g27989 NA 8e-84
95 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02