Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107445899 Ptep1.0/2.0 NW_024969636.1 625069 630372 + uncharacterized LOC107445899 aug3.g344,aug3.g18841,aug3.g21272,aug3.g2922,aug3.g21271 LOC107445899 0
LOC122271092 Ptep1.0/2.0 NW_024969636.1 673257 674183 + uncharacterized LOC122271092 aug3.g2922 NA 0
LOC107452613 Ptep1.0/2.0 NW_024969646.1 42031 147767 + lysine-specific demethylase 3B aug3.g292 LOC107452613 0
LOC122268741 Ptep1.0/2.0 NW_024969666.1 1319527 1321193 - uncharacterized LOC122268741 aug3.g2922,aug3.g14491 NA 0
LOC107449764 Ptep1.0/2.0 NW_024969669.1 199526 431853 + nephrin-like aug3.g2926 LOC107449764 0
LOC122268886 Ptep1.0/2.0 NW_024969697.1 835321 836126 + uncharacterized LOC122268886 aug3.g2922 NA 0
LOC107449765 Ptep1.0/2.0 NW_024970492.1 169139 190516 + graves disease carrier protein homolog aug3.g2929 LOC107449765 0
LOC107449754 Ptep1.0/2.0 NW_024970644.1 1976 52505 + mutS protein homolog 4 aug3.g2921 LOC107449754 0
LOC107449755 Ptep1.0/2.0 NW_024970644.1 53956 82663 - uncharacterized LOC107449755 aug3.g2920 LOC107449755 0
LOC122272955 Ptep1.0/2.0 NW_024973476.1 3079 12510 - graves disease carrier protein homolog aug3.g2929 NA 0
10 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02