Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107449976 Ptep1.0/2.0 NW_024969775.1 413675 528160 - cell adhesion molecule 2 aug3.g3049 LOC107449976 0
LOC107449981 Ptep1.0/2.0 NW_024969775.1 609541 632242 - transcription elongation factor S-II aug3.g3048 LOC107449981 0
LOC107449964 Ptep1.0/2.0 NW_024969794.1 414624 441170 - heat shock 70 kDa protein 14 aug3.g3042,aug3.g3041 LOC107449964 0
LOC107449963 Ptep1.0/2.0 NW_024969794.1 502003 830946 + uncharacterized LOC107449963 aug3.g3044 LOC107449963 0
LOC107449961 Ptep1.0/2.0 NW_024969794.1 883360 914000 - apoptosis-stimulating of p53 protein 2 aug3.g3045 LOC107449961 0
LOC107449960 Ptep1.0/2.0 NW_024969794.1 924401 971105 + neuroglian aug3.g3046,aug3.g3047 LOC107449960 0
LOC107453931 Ptep1.0/2.0 NW_024970294.1 288685 323887 + uncharacterized LOC107453931 aug3.g304 LOC107453931 0
LOC122270954 Ptep1.0/2.0 NW_024970474.1 10301 54563 + uncharacterized LOC122270954 aug3.g3040 LOC107449939 0
LOC107449939 Ptep1.0/2.0 NW_024970474.1 57061 138170 + lysosomal-trafficking regulator aug3.g3040 LOC107449939 0
9 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02