Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107455069 Ptep1.0/2.0 NW_024969685.1 463259 474616 - sphingosine-1-phosphate phosphatase 2 aug3.g329 LOC107455069 0
LOC107455074 Ptep1.0/2.0 NW_024969685.1 483750 569960 - cyclic AMP-dependent transcription factor ATF-3 aug3.g329 LOC107455074 0
LOC107450378 Ptep1.0/2.0 NW_024969707.1 752726 767238 - uncharacterized LOC107450378 aug3.g3290 LOC107450378 0
LOC107450391 Ptep1.0/2.0 NW_024969707.1 814414 837613 + uncharacterized LOC107450391 aug3.g3291 LOC107450391 0
LOC107450380 Ptep1.0/2.0 NW_024969707.1 851426 852082 - uncharacterized protein y4hQ aug3.g3292 LOC107450380 0
LOC107450389 Ptep1.0/2.0 NW_024969707.1 852416 895267 + regulatory-associated protein of mTOR aug3.g3293 LOC107450389 0
LOC107450381 Ptep1.0/2.0 NW_024969707.1 906382 936621 - uncharacterized LOC107450381 aug3.g3294 LOC107450381 0
LOC107450379 Ptep1.0/2.0 NW_024969707.1 950169 965777 - vesicle transport through interaction with t-SNAREs homolog 1A aug3.g3294 LOC107450379 0
LOC107450385 Ptep1.0/2.0 NW_024969707.1 971263 1041841 + long-chain-fatty-acid--CoA ligase 6 aug3.g3295 LOC107450385 0
LOC107450383 Ptep1.0/2.0 NW_024969707.1 1077329 1119114 + long-chain-fatty-acid--CoA ligase 1 aug3.g3296 LOC107450383 0
LOC107450392 Ptep1.0/2.0 NW_024969707.1 1123604 1137256 - uncharacterized LOC107450392 aug3.g3297 LOC107450392 0
LOC107450393 Ptep1.0/2.0 NW_024969707.1 1139646 1146140 - uncharacterized LOC107450393 aug3.g3298 LOC107450393 0
LOC107450395 Ptep1.0/2.0 NW_024969707.1 1150774 1161088 - uncharacterized LOC107450395 aug3.g3299 LOC107450395 0
LOC107450382 Ptep1.0/2.0 NW_024969707.1 1198690 1200873 - uncharacterized LOC107450382 aug3.g3305,aug3.g3302,aug3.g22182,aug3.g22181,aug3.g3304,aug3.g3300,aug3.g3299,aug3.g3306 LOC107450382 0
LOC122273306 Ptep1.0/2.0 NW_024975327.1 2937 5585 - uncharacterized LOC122273306 aug3.g3295 NA 2e-30
15 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02