Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107455060 Ptep1.0/2.0 NW_024969685.1 1050782 1070712 + DNA polymerase eta aug3.g334 LOC107455060 0
LOC107450447 Ptep1.0/2.0 NW_024970077.1 134120 139146 - uncharacterized LOC107450447 aug3.g3340 LOC107450447 9e-142
LOC107450434 Ptep1.0/2.0 NW_024970077.1 142783 147375 - uncharacterized LOC107450434 aug3.g3341 LOC107450434 0
LOC107450448 Ptep1.0/2.0 NW_024970077.1 163679 166431 - uncharacterized LOC107450448 aug3.g3342 LOC107450448 0
LOC107450430 Ptep1.0/2.0 NW_024970077.1 284541 347327 + protein O-mannosyl-transferase Tmtc3 aug3.g3343,aug3.g10539 LOC107450430 0
LOC107450456 Ptep1.0/2.0 NW_024970077.1 351696 380451 + DNA repair protein RAD51 homolog 2 aug3.g3344 LOC107450456 0
LOC122270172 Ptep1.0/2.0 NW_024970077.1 452913 508321 + uncharacterized LOC122270172 aug3.g3345 NA 6e-106
LOC107450449 Ptep1.0/2.0 NW_024970077.1 572959 592631 - mRNA decay activator protein ZFP36L1 aug3.g3346 LOC107450449 0
LOC107450444 Ptep1.0/2.0 NW_024970077.1 609601 614270 - uncharacterized LOC107450444 aug3.g3347 LOC107450444 0
LOC107450436 Ptep1.0/2.0 NW_024970077.1 618439 622949 + uncharacterized LOC107450436 aug3.g3348 LOC107450436 0
LOC107450450 Ptep1.0/2.0 NW_024970077.1 624999 654033 - serine/threonine-protein kinase TBK1 aug3.g3349 LOC107450450 0
11 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02