Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107455066 Ptep1.0/2.0 NW_024969685.1 1097817 1139116 + uncharacterized LOC107455066 aug3.g336 LOC107455066 0
LOC107450490 Ptep1.0/2.0 NW_024969925.1 168165 195881 - complement C2 aug3.g3368 LOC107450490 0
LOC107450470 Ptep1.0/2.0 NW_024969925.1 197251 216949 - testis-expressed protein 11-like aug3.g3367 LOC107450471,LOC107450470 0
LOC107450485 Ptep1.0/2.0 NW_024969925.1 238657 245322 - programmed cell death protein 2 aug3.g3366 LOC107450485 0
LOC107450486 Ptep1.0/2.0 NW_024969925.1 245410 254911 + phosphatidylinositol-glycan biosynthesis class X protein aug3.g3365 LOC107450486 0
LOC107450488 Ptep1.0/2.0 NW_024969925.1 267511 280912 + 40S ribosomal protein S17 aug3.g3364 LOC107450489,LOC107450488 0
LOC107450487 Ptep1.0/2.0 NW_024969925.1 286746 301965 - actin-related protein 2/3 complex subunit 1A-A aug3.g3363 LOC107450487 0
LOC107450472 Ptep1.0/2.0 NW_024969925.1 353554 372976 + homeobox protein koza aug3.g3361 LOC107450472 0
LOC107450469 Ptep1.0/2.0 NW_024969925.1 411037 470752 - structural maintenance of chromosomes protein 3 aug3.g3360,aug3.g8473,aug3.g22330,aug3.g8474 LOC107450469 0
9 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02