Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC122271096 Ptep1.0/2.0 NW_024969636.1 2783403 2785199 - uncharacterized LOC122271096 aug3.g3389 NA 0
LOC107455063 Ptep1.0/2.0 NW_024969685.1 1360982 1450060 - uncharacterized LOC107455063 aug3.g338 LOC107455063 0
LOC107439803 Ptep1.0/2.0 NW_024969806.1 46051 46656 - histone-lysine N-methyltransferase SETMAR-like aug3.g26902,aug3.g3388 LOC107439803 0
LOC107450496 Ptep1.0/2.0 NW_024970419.1 44114 309357 + ryanodine receptor aug3.g3384 LOC107450496 0
LOC107450501 Ptep1.0/2.0 NW_024970419.1 325428 356131 - orexin receptor type 2-like aug3.g3383 LOC107450501 0
LOC107450507 Ptep1.0/2.0 NW_024970585.1 100991 101470 - uncharacterized LOC107450507 aug3.g3389 LOC107450507 0
LOC107450510 Ptep1.0/2.0 NW_024970585.1 118248 119861 - uncharacterized LOC107450510 aug3.g3389 LOC107450510 0
LOC107450514 Ptep1.0/2.0 NW_024970585.1 125540 170749 - uncharacterized LOC107450514 aug3.g3389 LOC107450514 0
LOC122271490 Ptep1.0/2.0 NW_024970871.1 105736 108165 - uncharacterized LOC122271490 aug3.g5454,aug3.g3386 NA 0
LOC107443642 Ptep1.0/2.0 NW_024971267.1 5492 6736 - probable glutamate receptor aug3.g15100,aug3.g3387 LOC107443642 0
LOC107450497 Ptep1.0/2.0 NW_024971310.1 15958 60205 - ubiquitin-like modifier-activating enzyme ATG7 aug3.g3382 LOC107450497 0
LOC107450499 Ptep1.0/2.0 NW_024971310.1 60302 71348 + protein FAM177A1 aug3.g3381 LOC107450499 0
LOC107450498 Ptep1.0/2.0 NW_024971310.1 72082 103191 - degenerin deg-1 aug3.g3380 LOC107450498 0
LOC107440415 Ptep1.0/2.0 NW_024971325.1 4294 27347 + uncharacterized LOC107440415 aug3.g7186,aug3.g3389,aug3.g21939 LOC107440415 0
LOC107450505 Ptep1.0/2.0 NW_024971599.1 20569 21792 - probable glutamate receptor aug3.g3387 LOC107450505 0
15 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02