Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107451187 Ptep1.0/2.0 NW_024969829.1 615931 627184 + short-chain specific acyl-CoA dehydrogenase, mitochondrial-like aug3.g3397 LOC107451187 0
LOC107442864 Ptep1.0/2.0 NW_024969829.1 635418 642616 + short-chain specific acyl-CoA dehydrogenase, mitochondrial aug3.g3397 LOC107442864 0
LOC107452594 Ptep1.0/2.0 NW_024971817.1 3160 11733 + short-chain specific acyl-CoA dehydrogenase, mitochondrial-like aug3.g3397 LOC107452594 0
LOC122272342 Ptep1.0/2.0 NW_024971833.1 2796 6007 - short-chain specific acyl-CoA dehydrogenase, mitochondrial-like aug3.g3397 LOC107447186 3e-90
LOC122268307 Ptep1.0/2.0 NW_024971833.1 20908 51428 - short-chain specific acyl-CoA dehydrogenase, mitochondrial-like aug3.g3397,aug3.g3881 NA 0
LOC107437408 Ptep1.0/2.0 NW_024971881.1 3274 12058 - short-chain specific acyl-CoA dehydrogenase, mitochondrial-like aug3.g3397 LOC107437408 0
LOC107437409 Ptep1.0/2.0 NW_024971881.1 23776 39873 - short-chain specific acyl-CoA dehydrogenase, mitochondrial-like aug3.g3397 LOC107437409 0
LOC122273041 Ptep1.0/2.0 NW_024973823.1 2273 5373 - short-chain specific acyl-CoA dehydrogenase, mitochondrial-like aug3.g3397 NA 6e-87
LOC107447186 Ptep1.0/2.0 NW_024974445.1 1550 6791 - short-chain specific acyl-CoA dehydrogenase, mitochondrial-like aug3.g3397 LOC107447186 5e-171
LOC107450516 Ptep1.0/2.0 NW_024975781.1 34369 75035 + short-chain specific acyl-CoA dehydrogenase, mitochondrial aug3.g3397,aug3.g19787,aug3.g12268 LOC107450516 0
10 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02