Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107456150 Ptep1.0/2.0 NW_024969593.1 1829849 1891521 - amine oxidase [flavin-containing] aug3.g364,aug3.g365 LOC107456150 0
LOC107450859 Ptep1.0/2.0 NW_024969786.1 584806 615873 + protein flightless-1 homolog aug3.g3650 LOC107450859 0
LOC107450864 Ptep1.0/2.0 NW_024969786.1 620626 635152 + programmed cell death protein 10 aug3.g3651 LOC107450864 0
LOC107450866 Ptep1.0/2.0 NW_024969786.1 638143 640123 - RNA transcription, translation and transport factor protein aug3.g3652 LOC107450866 0
LOC107450865 Ptep1.0/2.0 NW_024969786.1 640314 649416 + ras-related protein Rab-31 aug3.g3653 LOC107450865 0
LOC107450862 Ptep1.0/2.0 NW_024969786.1 654351 659153 - prenylated Rab acceptor protein 1 aug3.g3654 LOC107450862 0
LOC107450861 Ptep1.0/2.0 NW_024969786.1 660392 682626 + dnaJ homolog subfamily C member 1 aug3.g3655 LOC107450861 0
LOC107450849 Ptep1.0/2.0 NW_024969786.1 685080 696936 - axin-1 aug3.g3656 LOC107450849 0
LOC107450867 Ptep1.0/2.0 NW_024969786.1 713209 753674 - uncharacterized LOC107450867 aug3.g3657 LOC107450867 0
LOC107450856 Ptep1.0/2.0 NW_024969786.1 775714 786560 + kappaPI-actitoxin-Avd3c-like aug3.g3659 LOC107450856 0
10 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02