Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107437226 Ptep1.0/2.0 NW_024969612.1 2192243 2215800 - L-threonine 3-dehydrogenase aug3.g376,aug3.g377 LOC107437226 0
LOC107451087 Ptep1.0/2.0 NW_024970020.1 503539 521882 + uncharacterized LOC107451087 aug3.g3768 LOC107451087 0
LOC107451085 Ptep1.0/2.0 NW_024970020.1 535945 537155 - glutathione S-transferase Mu 1-like aug3.g3767,aug3.g3766 LOC107451085 0
LOC107451103 Ptep1.0/2.0 NW_024970020.1 548980 556347 + uncharacterized LOC107451103 aug3.g3766 LOC107451103 5e-92
LOC107439174 Ptep1.0/2.0 NW_024970106.1 1480198 1507433 - S-adenosylmethionine sensor upstream of mTORC1 aug3.g26701,aug3.g19126,aug3.g2982,aug3.g27260,aug3.g11936,aug3.g23713,aug3.g2296,aug3.g22406,aug3.g8408,aug3.g22914,aug3.g21080,aug3.g20545,aug3.g3761,aug3.g4881,aug3.g19704,aug3.g16522,aug3.g5565,aug3.g11212,aug3.g25515,aug3.g3769,aug3.g3195,aug3.g26523 LOC107439174 0
LOC107436115 Ptep1.0/2.0 NW_024973126.1 36760 39090 + uncharacterized LOC107436115 aug3.g11331,aug3.g3760 LOC107436115 0
LOC122268549 Ptep1.0/2.0 NW_025000681.1 154 1080 - glutathione S-transferase Mu 1-like aug3.g3767 NA 0
7 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02