Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107454377 Ptep1.0/2.0 NW_024969612.1 1643591 1724467 + bone morphogenetic protein receptor type-2-like aug3.g380,aug3.g379,aug3.g22126 LOC107436470,LOC107454377 0
LOC107451109 Ptep1.0/2.0 NW_024969997.1 48101 59809 + uncharacterized LOC107451109 aug3.g3794 LOC107451109 0
LOC107451110 Ptep1.0/2.0 NW_024969997.1 70233 111506 - uncharacterized LOC107451110 aug3.g3793 LOC107451110 0
LOC107451107 Ptep1.0/2.0 NW_024969997.1 159695 186718 + uncharacterized LOC107451107 aug3.g3792 LOC107451107 0
LOC107451108 Ptep1.0/2.0 NW_024970282.1 147413 248907 + optomotor-blind protein aug3.g3790 LOC107451108 0
LOC107451118 Ptep1.0/2.0 NW_024970926.1 60616 83151 - uncharacterized LOC107451118 aug3.g3799 LOC107451118 0
LOC107451130 Ptep1.0/2.0 NW_024970926.1 94669 131917 + GATA zinc finger domain-containing protein 14 aug3.g3797 LOC107451130 0
LOC107451131 Ptep1.0/2.0 NW_024970926.1 139781 172218 - 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9-like aug3.g3796 LOC107451131 0
LOC107451132 Ptep1.0/2.0 NW_024970926.1 179646 181384 - zinc finger protein 883-like aug3.g3795 LOC107451132 0
9 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02