Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107438086 Ptep1.0/2.0 NW_024969612.1 1603956 1632889 - protein misato homolog 1 aug3.g381 LOC107438086 0
LOC107451125 Ptep1.0/2.0 NW_024969972.1 88565 89872 + uncharacterized protein F54H12.2-like aug3.g3816,aug3.g19322 LOC107451125 0
LOC107451117 Ptep1.0/2.0 NW_024969972.1 93107 96935 + uncharacterized LOC107451117 aug3.g3814 LOC107451117 0
LOC122269891 Ptep1.0/2.0 NW_024969972.1 99822 128971 - uncharacterized LOC122269891 aug3.g3813 NA 0
LOC107451127 Ptep1.0/2.0 NW_024969972.1 144906 487177 + caskin-2 aug3.g3811 LOC107451127 0
LOC107451128 Ptep1.0/2.0 NW_024969972.1 521634 658102 + cAMP-dependent protein kinase regulatory subunit aug3.g3810 LOC107451128 0
LOC107445492 Ptep1.0/2.0 NW_024970233.1 399886 401150 - speckle-type POZ protein B aug3.g18593,aug3.g3819,aug3.g3818,aug3.g3817,aug3.g3813 LOC107445492 0
LOC110282731 Ptep1.0/2.0 NW_024970233.1 422976 424043 - speckle-type POZ protein-like aug3.g3818 LOC110282731 0
LOC107451116 Ptep1.0/2.0 NW_024970233.1 430907 431983 - speckle-type POZ protein B-like aug3.g3818 LOC107451116 0
LOC110282732 Ptep1.0/2.0 NW_024970233.1 437084 437965 - speckle-type POZ protein B-like aug3.g3817 LOC110282732 0
LOC122271209 Ptep1.0/2.0 NW_024970638.1 262653 272448 + uncharacterized LOC122271209 aug3.g3816 NA 0
LOC122272170 Ptep1.0/2.0 NW_024971584.1 5220 8879 + uncharacterized LOC122272170 aug3.g3814 NA 0
12 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02