Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107438358 Ptep1.0/2.0 NW_024969612.1 1508315 1518442 - phosphatidylinositol 4-kinase type 2-beta aug3.g386 LOC107438358 0
LOC107451189 Ptep1.0/2.0 NW_024969687.1 2719708 2778604 - uncharacterized LOC107451189 aug3.g3860,aug3.g23355 LOC107451189 0
LOC107451190 Ptep1.0/2.0 NW_024969687.1 2812216 2959950 - uncharacterized LOC107451190 aug3.g3861 LOC107451190 0
LOC107451201 Ptep1.0/2.0 NW_024969687.1 2967069 3036646 - ubiquitin carboxyl-terminal hydrolase 24 aug3.g3862 LOC107451201 0
LOC107451203 Ptep1.0/2.0 NW_024969687.1 3042877 3053804 - rhythmically expressed gene 5 protein aug3.g3863 LOC107451203 0
LOC107451200 Ptep1.0/2.0 NW_024969688.1 753316 795475 - ribosomal protein S6 kinase beta-1 aug3.g3869 LOC107451200 0
LOC107451193 Ptep1.0/2.0 NW_024969688.1 800264 834211 - mucin-17 aug3.g3868 LOC107451193 0
LOC107451195 Ptep1.0/2.0 NW_024969688.1 833637 841390 + glutathione S-transferase theta-1 aug3.g3867 LOC107451195 0
LOC107451194 Ptep1.0/2.0 NW_024969688.1 843312 853694 - N-glycosylase/DNA lyase aug3.g3866 LOC107451194 0
LOC122268854 Ptep1.0/2.0 NW_024969688.1 868001 868783 - gastrula zinc finger protein XlCGF7.1-like aug3.g3865 NA 7e-90
10 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02