Pt_spiderBASE v3

[Top] [Home Ptep3.0] [Genes/Transcripts] [BLAST] [Info]

Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107436715 Ptep1.0/2.0 NW_024969612.1 1436667 1469172 - DNA-binding protein RFX2 aug3.g389 LOC107436715,LOC107438977 0
LOC122268819 Ptep1.0/2.0 NW_024969683.1 1064345 1065007 - uncharacterized LOC122268819 aug3.g3893 NA 0
LOC107451264 Ptep1.0/2.0 NW_024970061.1 5067 16920 - abhydrolase domain-containing protein C22H12.03-like aug3.g3896 LOC107451264 0
LOC107451268 Ptep1.0/2.0 NW_024970061.1 32978 53679 - protein ABHD11 aug3.g3897 LOC107451268 0
LOC107451273 Ptep1.0/2.0 NW_024970061.1 60601 93125 + ferredoxin-2, mitochondrial aug3.g3898 LOC107451273 0
LOC107451265 Ptep1.0/2.0 NW_024970061.1 84971 85754 - uncharacterized LOC107451265 aug3.g3899,aug3.g4072,aug3.g10673 LOC107451265 0
LOC107448150 Ptep1.0/2.0 NW_024971180.1 72028 75933 + retrovirus-related Pol polyprotein from transposon TNT 1-94 aug3.g3893,aug3.g5124,aug3.g27451,aug3.g1759,aug3.g27860,aug3.g4491,aug3.g13434 LOC107448150 0
LOC107451254 Ptep1.0/2.0 NW_024971417.1 59368 90192 + cyclin-dependent kinase 8-like aug3.g21134,aug3.g3892 LOC107451254 0
LOC110282542 Ptep1.0/2.0 NW_024971417.1 83856 87618 - copia protein aug3.g2202,aug3.g3891,aug3.g14510,aug3.g20883,aug3.g18224 LOC110282542 0
LOC122272127 Ptep1.0/2.0 NW_024971530.1 1409 11934 + fatty acyl-CoA reductase 1-like aug3.g3895 NA 5e-165
LOC107451261 Ptep1.0/2.0 NW_024971530.1 37101 67155 + fatty acyl-CoA reductase 1 aug3.g3895 LOC107451261 0
LOC122272383 Ptep1.0/2.0 NW_024971920.1 18240 40409 + fatty acyl-CoA reductase 1-like aug3.g3895 LOC107451261 0
LOC122273664 Ptep1.0/2.0 NW_024978309.1 689 2508 - uncharacterized LOC122273664 aug3.g3895 NA 5e-135
13 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

[Top] [Home Ptep3.0] [Genes/Transcripts] [BLAST] [Info]
Last updated by Hiroki Oda, 2022.11.02