Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107436894 Ptep1.0/2.0 NW_024969612.1 1030321 1221533 + zinc finger protein rotund aug3.g394 LOC107436894 0
LOC107451307 Ptep1.0/2.0 NW_024970517.1 274407 311409 - splicing factor 3B subunit 1 aug3.g3949 LOC107451307 0
LOC107451318 Ptep1.0/2.0 NW_024970517.1 311596 321800 + peptidyl-tRNA hydrolase 2, mitochondrial aug3.g3948 LOC107451318 0
LOC107451319 Ptep1.0/2.0 NW_024970532.1 2087 8556 - uncharacterized LOC107451319 aug3.g3947 LOC107451319 0
LOC107451304 Ptep1.0/2.0 NW_024970532.1 23394 28122 - uncharacterized LOC107451304 aug3.g3945 LOC107451304 0
LOC107451306 Ptep1.0/2.0 NW_024970532.1 43312 47720 - uncharacterized LOC107451306 aug3.g3944 LOC107451306 0
LOC107451305 Ptep1.0/2.0 NW_024970532.1 49882 57072 - uncharacterized LOC107451305 aug3.g3944 LOC107451305 0
LOC107451290 Ptep1.0/2.0 NW_024970532.1 74040 80379 - uncharacterized LOC107451290 aug3.g3943 LOC107451290 0
LOC107451311 Ptep1.0/2.0 NW_024970532.1 94521 115903 + cholinesterase aug3.g3941,aug3.g3942 LOC107451311 0
LOC107451316 Ptep1.0/2.0 NW_024970532.1 118540 138660 - dnaJ homolog subfamily C member 4 aug3.g3940 LOC107451316 0
10 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02