Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107439390 Ptep1.0/2.0 NW_024969612.1 829889 845789 - F-box/LRR-repeat protein 20 aug3.g399 LOC107439390 0
LOC107451392 Ptep1.0/2.0 NW_024969769.1 814353 839105 - uncharacterized LOC107451392 aug3.g3997 LOC107451392 0
LOC107451400 Ptep1.0/2.0 NW_024969769.1 842681 926048 - uncharacterized LOC107451400 aug3.g3998 LOC107451400 0
LOC107451407 Ptep1.0/2.0 NW_024969769.1 939729 941676 - probable DNA-3-methyladenine glycosylase aug3.g3999 LOC107451407 0
LOC107451380 Ptep1.0/2.0 NW_024970765.1 2286 12605 - ubiquitin-like protein 4A aug3.g3991,aug3.g4866 LOC107451380 0
LOC107451382 Ptep1.0/2.0 NW_024971330.1 8334 51373 + inversin aug3.g3990 LOC107451382,LOC107451371 0
LOC122272698 Ptep1.0/2.0 NW_024972546.1 2200 17502 - uncharacterized LOC122272698 aug3.g3990 NA 2e-29
LOC122272886 Ptep1.0/2.0 NW_024973195.1 46 9940 - uncharacterized LOC122272886 aug3.g3990 NA 1e-107
LOC122272905 Ptep1.0/2.0 NW_024973254.1 500 12094 + uncharacterized LOC122272905 aug3.g3990 NA 3e-146
9 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02