Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107451438 Ptep1.0/2.0 NW_024969892.1 963169 1050285 + afadin aug3.g4011,aug3.g19481,aug3.g18809 LOC110283474,LOC107451438 0
LOC122272517 Ptep1.0/2.0 NW_024972162.1 18576 30780 + afadin-like aug3.g4011 NA 0
LOC107445864 Ptep1.0/2.0 NW_024973251.1 3031 7593 + afadin aug3.g18808,aug3.g4011 LOC110282547,LOC107445864 4e-145
LOC122273189 Ptep1.0/2.0 NW_024974605.1 686 4927 - uncharacterized LOC122273189 aug3.g4011 NA 0
LOC122273255 Ptep1.0/2.0 NW_024975037.1 1118 6090 - uncharacterized LOC122273255 aug3.g4011 NA 0
LOC122273873 Ptep1.0/2.0 NW_024982138.1 1203 1900 - uncharacterized LOC122273873 aug3.g4011 NA 1e-51
6 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02