Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107443629 Ptep1.0/2.0 NW_024970028.1 5081 15214 - zinc finger protein 260 aug3.g411 LOC107443629 0
LOC107451582 Ptep1.0/2.0 NW_024970305.1 69416 95787 - probable RNA-binding protein 46 aug3.g4117 LOC107451582 0
LOC107451567 Ptep1.0/2.0 NW_024970305.1 113663 186619 - EF-hand calcium-binding domain-containing protein 14 aug3.g4115,aug3.g4116 LOC107451567 0
LOC107451578 Ptep1.0/2.0 NW_024970305.1 192509 266418 - dual serine/threonine and tyrosine protein kinase aug3.g4114 LOC107451578 0
LOC107451565 Ptep1.0/2.0 NW_024970305.1 295349 313790 + tonsoku-like protein aug3.g4111 LOC107451565 0
LOC107451566 Ptep1.0/2.0 NW_024970305.1 314306 335413 - F-box only protein 28 aug3.g4110 LOC107451566 0
LOC122272651 Ptep1.0/2.0 NW_024972457.1 10808 13882 - uncharacterized LOC122272651 aug3.g4115 NA 5e-80
LOC107449082 Ptep1.0/2.0 NW_024972771.1 2618 21182 - uncharacterized LOC107449082 aug3.g4115 LOC107449082 4e-93
8 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02