Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107440514 Ptep1.0/2.0 NW_024969624.1 574577 586814 - hemocyanin A chain aug3.g14603,aug3.g4193,aug3.g14602 LOC107440514 0
LOC107440513 Ptep1.0/2.0 NW_024969624.1 606645 644244 + uncharacterized LOC107440513 aug3.g14600,aug3.g14601,aug3.g4194,aug3.g4195 LOC107440513 0
LOC107437389 Ptep1.0/2.0 NW_024969749.1 49617 87994 - uncharacterized LOC107437389 aug3.g26249,aug3.g26250,aug3.g4196 LOC107437389 0
LOC107443709 Ptep1.0/2.0 NW_024970028.1 380739 529368 - huntingtin aug3.g419 LOC107443709 0
LOC122271188 Ptep1.0/2.0 NW_024970632.1 1058 3169 - uncharacterized LOC122271188 aug3.g4192 NA 5e-143
LOC107451660 Ptep1.0/2.0 NW_024970846.1 24518 42153 - vitamin K-dependent protein C aug3.g4198 LOC107451660 0
LOC107451656 Ptep1.0/2.0 NW_024970846.1 57153 126252 - uncharacterized LOC107451656 aug3.g4196,aug3.g4197 LOC107451656,LOC107451658,LOC107451654 0
LOC107451657 Ptep1.0/2.0 NW_024970846.1 134598 147707 - hemocyanin D chain aug3.g4194 LOC107451657 0
LOC107451659 Ptep1.0/2.0 NW_024970846.1 159341 179299 + hemocyanin A chain aug3.g4193 LOC107451659 0
LOC122272161 Ptep1.0/2.0 NW_024971578.1 2798 3426 - uncharacterized LOC122272161 aug3.g4192,aug3.g17829 NA 0
LOC107451652 Ptep1.0/2.0 NW_024971578.1 42259 43116 - uncharacterized LOC107451652 aug3.g4190 LOC107451652 0
LOC122273829 Ptep1.0/2.0 NW_024981056.1 83 3089 + uncharacterized LOC122273829 aug3.g4191 NA 3e-68
LOC122268601 Ptep1.0/2.0 NW_025005032.1 4 705 - THAP domain-containing protein 2-like aug3.g4191 NA 1e-61
13 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02