Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107443737 Ptep1.0/2.0 NW_024970028.1 640199 641750 + protein mab-21 aug3.g421 LOC107443737 0
LOC107451686 Ptep1.0/2.0 NW_024970140.1 5384 38804 + organic cation transporter protein aug3.g4210 LOC107451686 0
LOC107451679 Ptep1.0/2.0 NW_024970140.1 52505 94676 + apoptotic chromatin condensation inducer in the nucleus aug3.g4212,aug3.g4211 LOC107451679 0
LOC107451680 Ptep1.0/2.0 NW_024970140.1 100371 122751 - uncharacterized protein PFB0765w aug3.g4213 LOC107451680 0
LOC107451681 Ptep1.0/2.0 NW_024970140.1 122880 130450 + cytochrome b5 aug3.g4214 LOC107451681 0
LOC107451682 Ptep1.0/2.0 NW_024970140.1 132143 140076 - uncharacterized LOC107451682 aug3.g4215 LOC107451682 0
LOC107451688 Ptep1.0/2.0 NW_024970140.1 149498 162538 - RNA-binding protein NOB1 aug3.g4216 LOC107451688 0
LOC107451687 Ptep1.0/2.0 NW_024970140.1 162572 186787 + unconventional prefoldin RPB5 interactor aug3.g4217 LOC107451687 0
LOC107451683 Ptep1.0/2.0 NW_024970140.1 190851 198571 - 60S ribosomal protein L7a aug3.g4218 LOC107451683 0
LOC107451678 Ptep1.0/2.0 NW_024970140.1 212066 237705 + ras GTPase-activating protein-binding protein 2 aug3.g4219,aug3.g4220 LOC107451678 0
10 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02