Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107451732 Ptep1.0/2.0 NW_024969647.1 764735 793107 + serine/threonine-protein kinase BRSK2-like aug3.g4265 LOC107451732 0
LOC107451731 Ptep1.0/2.0 NW_024969647.1 808827 836133 - cat eye syndrome critical region protein 2 homolog aug3.g4263,aug3.g4264 LOC107451731,LOC107451744 0
LOC107451736 Ptep1.0/2.0 NW_024969647.1 836395 862824 + uncharacterized LOC107451736 aug3.g4262 LOC107451736 0
LOC107451734 Ptep1.0/2.0 NW_024969647.1 878131 902863 - caprin-1 aug3.g4261 LOC107451734 0
LOC107451741 Ptep1.0/2.0 NW_024969647.1 933392 936264 - uncharacterized LOC107451741 aug3.g4260 LOC107451741 0
LOC122268821 Ptep1.0/2.0 NW_024969684.1 1700 59025 - serine/threonine-protein kinase BRSK2-like aug3.g4265 NA 0
LOC107451735 Ptep1.0/2.0 NW_024969684.1 69716 109370 - palmitoyltransferase ZDHHC17 aug3.g4266 LOC107451735 0
LOC107451737 Ptep1.0/2.0 NW_024969684.1 109526 168795 + cysteine and glycine-rich protein 1 aug3.g4267,aug3.g4269,aug3.g4268 LOC107451737 0
LOC122268952 Ptep1.0/2.0 NW_024969706.1 1873621 1877533 + uncharacterized LOC122268952 aug3.g426 NA 0
9 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02