Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107452499 Ptep1.0/2.0 NW_024969878.1 643077 662894 - N-acetylglucosamine-6-sulfatase aug3.g439 LOC107452499 0
LOC107451907 Ptep1.0/2.0 NW_024971146.1 153544 163415 - general transcription factor II-I repeat domain-containing protein 2B-like aug3.g4390,aug3.g5353 LOC107451907 0
LOC107451914 Ptep1.0/2.0 NW_024971268.1 19250 51749 + acyl-coenzyme A synthetase ACSM3, mitochondrial aug3.g4394 LOC107451914 0
LOC107451911 Ptep1.0/2.0 NW_024971268.1 54822 74942 + peroxisomal membrane protein PMP34 aug3.g4393 LOC107451911 0
LOC107451912 Ptep1.0/2.0 NW_024971268.1 89131 100198 + phospholipase A2 SSD387 aug3.g4392 LOC107451912 0
LOC107451910 Ptep1.0/2.0 NW_024971268.1 116484 150550 - diacylglycerol lipase-beta aug3.g4391 LOC107451910 0
LOC107451909 Ptep1.0/2.0 NW_025029433.1 62690 75099 - uncharacterized LOC107451909 aug3.g4398 LOC107451909 0
LOC107451913 Ptep1.0/2.0 NW_025029433.1 76648 107533 + acyl-coenzyme A synthetase ACSM3, mitochondrial aug3.g4397 LOC107451913 0
LOC107451908 Ptep1.0/2.0 NW_025029433.1 123334 152114 + uncharacterized LOC107451908 aug3.g4396 LOC107451908 0
LOC107451916 Ptep1.0/2.0 NW_025029433.1 154053 165284 - flavin-containing monooxygenase 5-like aug3.g4395 LOC107451916 0
LOC122268706 Ptep1.0/2.0 NW_025029433.1 167218 171513 + uncharacterized LOC122268706 aug3.g4394 LOC107451914 0
11 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02