Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107452159 Ptep1.0/2.0 NW_024969634.1 36385 106695 - Down syndrome cell adhesion molecule-like protein Dscam2 aug3.g4548 LOC107452159 0
LOC107452164 Ptep1.0/2.0 NW_024969634.1 283226 289366 - U9-ctenitoxin-Pr1a aug3.g4545 LOC107452164 0
LOC122271364 Ptep1.0/2.0 NW_024969640.1 2453570 2454612 - uncharacterized LOC122271364 aug3.g4549,aug3.g20297 NA 0
LOC122268797 Ptep1.0/2.0 NW_024969678.1 1942 2415 - uncharacterized LOC122268797 aug3.g23542,aug3.g4544 NA 0
LOC107452585 Ptep1.0/2.0 NW_024969682.1 1414553 1456852 - lachesin aug3.g454 LOC107452585 0
LOC107452153 Ptep1.0/2.0 NW_024970370.1 9097 161047 + rho guanine nucleotide exchange factor 17 aug3.g4540 LOC107452153 0
LOC107452154 Ptep1.0/2.0 NW_024970370.1 100479 114480 + uncharacterized LOC107452154 aug3.g4540 LOC107452154 7e-131
LOC107452158 Ptep1.0/2.0 NW_024971863.1 25480 29849 + uncharacterized LOC107452158 aug3.g4541 LOC107452158 0
LOC107436914 Ptep1.0/2.0 NW_024972978.1 8312 12278 - uncharacterized LOC107436914 aug3.g11922,aug3.g18833,aug3.g4541,aug3.g6125,aug3.g19073,aug3.g1633,aug3.g5302,aug3.g9817 LOC107436914 0
9 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02