Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC122269518 Ptep1.0/2.0 NW_024969847.1 394332 432814 - diacylglycerol kinase theta-like aug3.g4651 LOC107452310 0
LOC107452307 Ptep1.0/2.0 NW_024969847.1 453088 505151 + protein eyes shut homolog aug3.g4652 LOC107452307 0
LOC107452299 Ptep1.0/2.0 NW_024969847.1 568346 578644 + 14-3-3 protein zeta aug3.g4653 LOC107452299 0
LOC107452298 Ptep1.0/2.0 NW_024969847.1 583873 686598 - transformation/transcription domain-associated protein aug3.g4654,aug3.g24607 LOC107452298 0
LOC107452303 Ptep1.0/2.0 NW_024969847.1 692737 714912 + L-galactose dehydrogenase-like aug3.g4655 LOC107452303 0
LOC107452300 Ptep1.0/2.0 NW_024969847.1 713311 728843 - PAT complex subunit CCDC47 aug3.g4656 LOC107452300 0
LOC107452302 Ptep1.0/2.0 NW_024969847.1 728875 749906 + tubulin-specific chaperone cofactor E-like protein aug3.g4657,aug3.g4658 LOC107452302 0
LOC107452311 Ptep1.0/2.0 NW_024969847.1 755047 798379 - Down syndrome cell adhesion molecule-like protein Dscam2 aug3.g4658 LOC107452311 0
LOC122269515 Ptep1.0/2.0 NW_024969847.1 799175 801811 - Down syndrome cell adhesion molecule-like protein 1 homolog aug3.g4658 NA 7e-155
LOC110283004 Ptep1.0/2.0 NW_024969847.1 803674 864849 - titin-like aug3.g4658,aug3.g4659 LOC110283004 0
LOC107443538 Ptep1.0/2.0 NW_024970662.1 178631 197897 - polyhomeotic-proximal chromatin protein aug3.g465 LOC107443538 0
LOC107444834 Ptep1.0/2.0 NW_024971431.1 11983 31044 + uncharacterized LOC107444834 aug3.g10065,aug3.g4654 LOC107444834 0
LOC107453737 Ptep1.0/2.0 NW_024972438.1 892 15912 + transcription-associated protein 1 aug3.g4654 LOC107453737 3e-112
LOC122272712 Ptep1.0/2.0 NW_024972584.1 8345 17997 - transcription-associated protein 1-like aug3.g4654 NA 0
LOC122273012 Ptep1.0/2.0 NW_024973709.1 8571 10265 + transcription-associated protein 1-like aug3.g4654 NA 2e-146
LOC122273204 Ptep1.0/2.0 NW_024974674.1 18 4613 + uncharacterized LOC122273204 aug3.g4654 NA 4e-67
LOC122273220 Ptep1.0/2.0 NW_024974800.1 5079 6714 - uncharacterized LOC122273220 aug3.g4654 NA 4e-86
LOC122273415 Ptep1.0/2.0 NW_024975927.1 807 5407 + transcription-associated protein 1-like aug3.g4654 LOC107453737 0
LOC107453738 Ptep1.0/2.0 NW_024976744.1 1614 2886 - uncharacterized LOC107453738 aug3.g4654 LOC107453738 1e-125
19 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02